Gene
| Gene Model ID | pfu_aug1.0_2637.1_30198 |
|---|---|
| Locus | scaffold2637.1 : 46356 ... 53554 : + |
| To GenomeBrowser | scaffold2637.1:46356..53554 |
| Genes list of scaffold | scaffold2637.1 |
| Synonym | pfu_aug2.0_1109.1_31449 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | bmp10-like |
| Description | NCBI BLASTP hit to emb|CAD67715.1| |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2637.1_30198.t1 | 2 | 1 | TGFb_propeptide | 80 | 122 | 8.8e-14 | 51.3 | 1.1e-08 | 0.00017 | 20.9 |
| pfu_aug1.0_2637.1_30198.t1 | 2 | 2 | TGFb_propeptide | 122 | 187 | 8.8e-14 | 51.3 | 8.2e-12 | 1.2e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2637.1_30198.t1 | gi|28475273|emb|CAD67715.1| | GDF3 precursor [Crassostrea gigas] | 8.99999e-40 |
Transcript
| Transcript ID | pfu_aug1.0_2637.1_30198.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2637.1_30198.t1 atgaccacaagacccactagtgattgtaaggactgcgatgacaaggacgctcaaaataggaccaaacgattcacccagga ttacgattatagtgaatactacgacgatatcgaaattggaatcatagaggagaagaaaacactacaaaacagtcgtattg caccacctggcttgaatatagacaattctgttaggtctttatcgcttagtaaagacttaagggtcaatatagaattgaca ccaaggtcgcctaaagaggcacctgactatatgatggaactgtacgatagattctctaaaaaccgacttaatcatccatc gtcgaatattgttagaagcttcagtaatataaataacgaagattcaaaacatatctatggcagagacagttcatgggaaa catttgacgtcacatcggctgtaagacggtgggtacagaaatttaactctatacagattttggagattcgtatagaaagc gtgtttcattcagtgtcgatgggggatttagatattttaaccaaaaacagtaacaagaatgaacctctattagttgtctt ctcaagtgatgacagaaaaagaaaacttcacgaaaacgagcgtcacgaattggtgacgcatgaaatggatatgtacgacg tccaagatgatctcagtgttgattcaccatctaatgacaatataacagatgacactaacagtgatatagttctcaataga tttaaacgtaggggtcgtcgacacgctgtttgcaggagaaagcctatgactagacttgattaa |
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Protein
| Protein ID | pfu_aug1.0_2637.1_30198.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2637.1_30198.t1 MTTRPTSDCKDCDDKDAQNRTKRFTQDYDYSEYYDDIEIGIIEEKKTLQNSRIAPPGLNIDNSVRSLSLSKDLRVNIELT PRSPKEAPDYMMELYDRFSKNRLNHPSSNIVRSFSNINNEDSKHIYGRDSSWETFDVTSAVRRWVQKFNSIQILEIRIES VFHSVSMGDLDILTKNSNKNEPLLVVFSSDDRKRKLHENERHELVTHEMDMYDVQDDLSVDSPSNDNITDDTNSDIVLNR FKRRGRRHAVCRRKPMTRLD |
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