Gene
| Gene Model ID | pfu_aug1.0_2651.1_30207 |
|---|---|
| Locus | scaffold2651.1 : 31536 ... 48574 : + |
| To GenomeBrowser | scaffold2651.1:31536..48574 |
| Genes list of scaffold | scaffold2651.1 |
| Synonym | pfu_aug2.0_258.1_27122 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2651.1_30207.t1 | 6 | 1 | PC_rep | 302 | 325 | 4.7e-14 | 51.7 | 3.6e-06 | 0.013 | 15.6 |
| pfu_aug1.0_2651.1_30207.t1 | 6 | 2 | PC_rep | 378 | 401 | 4.7e-14 | 51.7 | 3.6e-06 | 0.013 | 15.6 |
| pfu_aug1.0_2651.1_30207.t1 | 6 | 3 | PC_rep | 459 | 473 | 4.7e-14 | 51.7 | 0.61 | 2300.0 | -0.9 |
| pfu_aug1.0_2651.1_30207.t1 | 6 | 4 | PC_rep | 557 | 587 | 4.7e-14 | 51.7 | 0.00062 | 2.3 | 8.6 |
| pfu_aug1.0_2651.1_30207.t1 | 6 | 5 | PC_rep | 590 | 615 | 4.7e-14 | 51.7 | 4.6e-08 | 0.00017 | 21.6 |
| pfu_aug1.0_2651.1_30207.t1 | 6 | 6 | PC_rep | 629 | 640 | 4.7e-14 | 51.7 | 0.091 | 340.0 | 1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2651.1_30207.t1 | gi|67968534|dbj|BAE00628.1| | unnamed protein product [Macaca fascicularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2651.1_30207.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2651.1_30207.t1 atgtatactaataattatgctgaacaacatcaggaatttattgtaatatttcagattcgattgataatgacgttcatgat tttagagtcagaagaagacaaacaactccaagatgaacttaatatgttggttgagagacttaaggagccagaccagaaat tgtaccgtcctgcattggagagtttacgatcccagatacgtgcctctacgacctccatgacttctgtacccaagccactc aaattcctccgccctcactatgactcactgaaagaagtatacgaaaaaataaaagacatggaaacaaagagattttgcgc agatatcatatcagttatgggaatgacaaagtcaggggaagaaagagacagccttaaatacaggctcctgggatcaaaag aggaaataggttcctggggtcacgaatatgtcagacacttagcaggacaagttgctcaggagtggcaggacttaggggag caggataacgagatgagagagaaacttctaacgatgaccaaggagattgtaccgtaccacatggaccataatgccgaggc cgaggcttgtgatctactcatggaaatagaaaaactcgaccttctccaaaactacgtagacgaaaatgtctatccaaggg tgtgtttgtatctcacaagctgtgtaccatatgtaccagatcctgagaacaccacattactaaggacagctgtagactta tatagaaagtttaatcagtacccacaagccatacggtttgccatgcagcttaatgatatggctcttgtggaagagatctt cacatcctgcaaggattcctttgaaatcgtgttgctaactacgttgtttatgacgttgctaagcatgtacttccgttttg tgttgatacaggtgattggtatggcagcgttagcatgtggtatgatctgtgtgggaagctgtaatggggatgtcacatcc acaatactacagaccatgatggagagacctgaggctgatcttaaagatacaaacgctagattcctagctatgggattagc actcgcttacctaggtaaaaatctcgatactgtaaaacgcttcatttttgtgaagttttcaaaattgaaaaagaaaaagg tgattggtatggcagcgttagcatgtggtatgatctgtgtgggaagctgtaatggggacgtcacatccacaatactacag accatgatggagagacccgaggctgatcttaaagatacaaacgctagattcctagctatgggattagcactcgcttacct aggtaaacaagatgcagttgatgctactttgatggcattagaggttataggagagcccctcaaatctatggccaggatga tggtggatgtatgcgcttatgcaggtactggaaatgttttaaaaattcagcatcttctacatgtatgttcagaacatgat gaatctaaagatcaggataataatgagaaaggagatgataaaaagaaggataagaaagataaagagaaggaaaaagaagt atcagctgacttgtcatgtcaacaaggtatagctgtattaggtatagcactaatagccatgggagaggatgtgggagcag aaatgtcatttcgagcctttggacatctgttaagatatggtgaggtggccatcaagagagctgtaccattagccctcggt ctgatctctgtctccaaccccaagctacaaatacttgatacgttaagtaaattctcacatgacagtgaccctgaagtatc ccataatgcaatattagccatgggaattgtaggtgccggtacaaataatgcccgtctggctgcaatgttacgtcagttag ctgtgtatcatgccaaggaccctaacaatctatttatggtgaggttagcccagggcctgacccatttaggtaaaggtacc ctgacactgtgtccttatcacagtgataaagccctcatgtcacctgttgctgtggctggactcctggctgtccttgtgtc ctgtctagatgtcaaaaatttaattataggtaaatctcactacacattataccatttggttgccgccatgcagcctcgta tgttaacaacatttgatgaagagcttcgcccactacctgtacctgtcagggttggccaggcagtagatgttgtgggacag gcaggtaagcctaagacaattacaggattccagacacataccacaccagtactcttagcttacggagaaagggcggaact agctacagaagaatatttatcattaagtcccatcatggagggctttgtcattctcaggaagaacccggactatgaagaat ga |
|
Protein
| Protein ID | pfu_aug1.0_2651.1_30207.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2651.1_30207.t1 MYTNNYAEQHQEFIVIFQIRLIMTFMILESEEDKQLQDELNMLVERLKEPDQKLYRPALESLRSQIRASTTSMTSVPKPL KFLRPHYDSLKEVYEKIKDMETKRFCADIISVMGMTKSGEERDSLKYRLLGSKEEIGSWGHEYVRHLAGQVAQEWQDLGE QDNEMREKLLTMTKEIVPYHMDHNAEAEACDLLMEIEKLDLLQNYVDENVYPRVCLYLTSCVPYVPDPENTTLLRTAVDL YRKFNQYPQAIRFAMQLNDMALVEEIFTSCKDSFEIVLLTTLFMTLLSMYFRFVLIQVIGMAALACGMICVGSCNGDVTS TILQTMMERPEADLKDTNARFLAMGLALAYLGKNLDTVKRFIFVKFSKLKKKKVIGMAALACGMICVGSCNGDVTSTILQ TMMERPEADLKDTNARFLAMGLALAYLGKQDAVDATLMALEVIGEPLKSMARMMVDVCAYAGTGNVLKIQHLLHVCSEHD ESKDQDNNEKGDDKKKDKKDKEKEKEVSADLSCQQGIAVLGIALIAMGEDVGAEMSFRAFGHLLRYGEVAIKRAVPLALG LISVSNPKLQILDTLSKFSHDSDPEVSHNAILAMGIVGAGTNNARLAAMLRQLAVYHAKDPNNLFMVRLAQGLTHLGKGT LTLCPYHSDKALMSPVAVAGLLAVLVSCLDVKNLIIGKSHYTLYHLVAAMQPRMLTTFDEELRPLPVPVRVGQAVDVVGQ AGKPKTITGFQTHTTPVLLAYGERAELATEEYLSLSPIMEGFVILRKNPDYEE |
|