Gene
| Gene Model ID | pfu_aug1.0_2651.1_30208 |
|---|---|
| Locus | scaffold2651.1 : 50083 ... 62355 : - |
| To GenomeBrowser | scaffold2651.1:50083..62355 |
| Genes list of scaffold | scaffold2651.1 |
| Synonym | pfu_aug2.0_258.1_27123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2651.1_30208.t1 | 1 | 1 | Ferritin | 169 | 289 | 5.0e-37 | 126.8 | 4.69996e-41 | 7.0e-37 | 126.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2651.1_30208.t1 | gi|33333949|gb|AAQ12076.1| | ferritin-like protein [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2651.1_30208.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2651.1_30208.t1 atgtacccggatcatgacggatatgatgagtttgctcgcacgtctcagccaggattctcacaaagccctgcggcatatta ttcaggagctgactcgaacccctatctccaacagatgagaatatcaagggatagttcttttgaccgtgccttttcaagaa aaacaaaaagtcgtggtaaaagtagtgtgcatgaaccaaataaagaatatgagttacagagaatttatggagcgtcacag agcagaaatcaaaggaaatccaggggtagatcccgggacaggacaatgacatctgatgatgatgagggcattgttagtag gagtttagctgctcaaagacagagggataaatccctagatgactgggagagacgtatgttgatgaagagtaggaaggcaa caccggtaaaaccctcaataaacaggtttacagacagcgagaacgagtcacctgacaggggcaagaaaaaggagggatac tcaaactggggaccccagacaaaggcaatgtactttgatagagatgatgtggctctcccaggatttagtaaattttttaa gaagagttctgatgaagagagaggccatgctgagaagttgatgaagtatcagaacaaacgtggaggaagaattgtattac agaatatacagaagcccgaccgtgatgagtgggggacgggactagaagccatgcagacaactctaagtctggagaagaat gtaaatcaatccttactggatctacatcgtgtcgccaatactcatggagatgaacagatggcagattttatagagtcgga gttcctagaggagcaggttgaggcaatcaaggagatctctgattacatcactcaactcaaacgagtcggtccgggactcg gagagttccactttgaccaaaaactaggatcagcttag |
|
Protein
| Protein ID | pfu_aug1.0_2651.1_30208.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2651.1_30208.t1 MYPDHDGYDEFARTSQPGFSQSPAAYYSGADSNPYLQQMRISRDSSFDRAFSRKTKSRGKSSVHEPNKEYELQRIYGASQ SRNQRKSRGRSRDRTMTSDDDEGIVSRSLAAQRQRDKSLDDWERRMLMKSRKATPVKPSINRFTDSENESPDRGKKKEGY SNWGPQTKAMYFDRDDVALPGFSKFFKKSSDEERGHAEKLMKYQNKRGGRIVLQNIQKPDRDEWGTGLEAMQTTLSLEKN VNQSLLDLHRVANTHGDEQMADFIESEFLEEQVEAIKEISDYITQLKRVGPGLGEFHFDQKLGSA |
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