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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_26553.1_19129
Locus scaffold26553.1 : 1 ... 32026 : +
To GenomeBrowser scaffold26553.1:1..32026
Genes list of scaffold scaffold26553.1
Synonym pfu_aug2.0_1137.1_24710

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_26553.1_19129.t1 gi|348572001|ref|XP_003471783.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
trochophore 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_26553.1_19129.t1
Definition-
>pfu_aug1.0_26553.1_19129.t1
gttccatcgttggttgataagatgatttcagctacaagtatcggaggaaaatctggtgcccagtcaatggaagccctaca
gttactattgaagagaccctgggaccctgtggctaatctatatgctcaacaaaaactgaataaattaccaggcaatccac
tgatcctgatagcaccgagtggacctacctacagcggtcatagttataccaagaggacacgattctggaacagccaactg
tcacaccttggcaaggtcatcccggtcaccatgcacaccgtgaatggagggaacggtgtggggatagcccagtgtctgga
acacatgatcggggcagtcaggaccaaagtcttagaggatttagaggacagtttattggagagtaagacacctacgatgt
ttgtaatcggccagcattccacgaccgcttctatagacaacatggaggacctacgtgagaggatgaaggccgagaacaat
ctcctggtggtgggcggggctgacaacgccctcagattgactcgagcaaagaaaaaacgagaaggaatcactcaagtcat
ggcagataaacagatgttggacaatgtgtcagatttccttggaggaattttatcaaggtcggaacatctcaatgcagaat
ctgccgatttatcagaaaatgaacagaaaaagaagaaaaagaaaaaggagcgttcccctgggtctgcatcccgggccatg
agtgtagcgaaagcactgaagacagctcgtcaacaagcagaactgaaccagctgagggtggggcatcaaacagcccagac
caatcagctgtcaggggcggggcaaatctctgctgccttagccaatcagcttgttggtacaggtcttacagatcggactg
aactggaaattaagcatcatctgattggacaaagttttaccgtagttttgttctga

Protein
Protein IDpfu_aug1.0_26553.1_19129.t1
Definition-
>pfu_aug1.0_26553.1_19129.t1
VPSLVDKMISATSIGGKSGAQSMEALQLLLKRPWDPVANLYAQQKLNKLPGNPLILIAPSGPTYSGHSYTKRTRFWNSQL
SHLGKVIPVTMHTVNGGNGVGIAQCLEHMIGAVRTKVLEDLEDSLLESKTPTMFVIGQHSTTASIDNMEDLRERMKAENN
LLVVGGADNALRLTRAKKKREGITQVMADKQMLDNVSDFLGGILSRSEHLNAESADLSENEQKKKKKKKERSPGSASRAM
SVAKALKTARQQAELNQLRVGHQTAQTNQLSGAGQISAALANQLVGTGLTDRTELEIKHHLIGQSFTVVLF

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