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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_265660.1_50281
Locus scaffold265660.1 : 5 ... 535 : -
To GenomeBrowser scaffold265660.1:5..535
Genes list of scaffold scaffold265660.1
Synonym NA

Manual annotation
Study fieldBiomineralization
Gene nameKRMP1
DescriptionNCBI blastp best hit to AAZ95763.1.
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_265660.1_50281.t1 gi|89032111|gb|AAZ95763.1| lysine-rich matrix protein-1 [Pinctada fucata] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_265660.1_50281.t1
Definition-
>pfu_aug1.0_265660.1_50281.t1
atgaagttcgccgctgttttggccgttttcctcctccttggagcattcagtgcagatggaatctggcataagcctaatct
gaatatctgctggtggaagctgaagtggtgcctcaagaaatgtcacccttgggattggaaatgcaaaaagaaatgttttt
ggaagtataaatggtgccttaagaaatttggtggacatttttcgtatggtccagggtccagtggtggatatggattcgat
ggatatggtggcgatgattacaactttggctatggtcatcgtaaatacaaatattaa

Protein
Protein IDpfu_aug1.0_265660.1_50281.t1
Definition-
>pfu_aug1.0_265660.1_50281.t1
MKFAAVLAVFLLLGAFSADGIWHKPNLNICWWKLKWCLKKCHPWDWKCKKKCFWKYKWCLKKFGGHFSYGPGSSGGYGFD
GYGGDDYNFGYGHRKYKY

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