Gene
| Gene Model ID | pfu_aug1.0_26578.1_40629 |
|---|---|
| Locus | scaffold26578.1 : 1 ... 8315 : - |
| To GenomeBrowser | scaffold26578.1:1..8315 |
| Genes list of scaffold | scaffold26578.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_26578.1_40629.t1 | 1 | 1 | Rotamase_3 | 25 | 89 | 1.1e-09 | 38.5 | 8.5e-13 | 4.2e-09 | 36.6 |
| pfu_aug1.0_26578.1_40629.t1 | 1 | 1 | Rotamase | 34 | 86 | 4.3e-11 | 43.4 | 1.7e-14 | 8.4e-11 | 42.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_26578.1_40629.t1 | gi|91087021|ref|XP_974228.1| | PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Tribolium castaneum] | 2.0e-23 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_26578.1_40629.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26578.1_40629.t1 atgccaaagaataaaggcggtggtggaggtgccaagggtggaaaaggggcaaaaggtggagatggaggaggcgatactca gaaacagactaaaggaggaacttcagtgaagggagacttaggatggatgacacgaggtagtatggtgggtcctttccaag atgctgcattcgctctccctacaagctcattatctaatccagtgtatacagaccctcctgtgaaaacaaaatttggatat catattattatggtggaaggaaaaaagtga |
|
Protein
| Protein ID | pfu_aug1.0_26578.1_40629.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26578.1_40629.t1 MPKNKGGGGGAKGGKGAKGGDGGGDTQKQTKGGTSVKGDLGWMTRGSMVGPFQDAAFALPTSSLSNPVYTDPPVKTKFGY HIIMVEGKK |
|