Gene
| Gene Model ID | pfu_aug1.0_26578.1_40630 |
|---|---|
| Locus | scaffold26578.1 : 9966 ... 15349 : + |
| To GenomeBrowser | scaffold26578.1:9966..15349 |
| Genes list of scaffold | scaffold26578.1 |
| Synonym | pfu_aug2.0_125.1_16972 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_26578.1_40630.t1 | 2 | 1 | DUF3752 | 72 | 91 | 6.7e-32 | 110.7 | 0.27 | 2000.0 | -1.3 |
| pfu_aug1.0_26578.1_40630.t1 | 2 | 2 | DUF3752 | 113 | 240 | 6.7e-32 | 110.7 | 9.0e-36 | 6.7e-32 | 110.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_26578.1_40630.t1 | gi|224043419|ref|XP_002198719.1| | PREDICTED: GPALPP motifs-containing protein 1 [Taeniopygia guttata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_26578.1_40630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26578.1_40630.t1 atggaggacagtaatgtgattggtccgtcattaccctcacatcttagcaatagaaacaatgaatataatgtagactcttc atctattggaccaaacataccaaattatacctcggggagttataatgaggaaagtgatagtgaggaggattatgttggac cacgcccctcagagatgacccatggggatactgatcacattacagcagcagagtttgaggctcgttccagaagaatgaag gatcgtatagatggcaagacatcaggtgaagataaatctgtgaagagagaatcatggatgacagtgcttccagattgcct tggtcagaatattggtctacaagcccgtagttttcgtgtccagcaaggaccagacatgagtgaccgatcagcctggacag atacacctgctgacagagaacgcaagcttaaggaacagagtgatggaggaaggaaacgtaagcatgaagagagcaagaaa tccagtagagacaccaagctagctaaagagatagagcagtataataaatcaaaaagatcggaatcgcttttagaccttca tcagaagaaattaaaaagcaaacagaaggaagaggaagacaagcccgctgtacgacgtccatttgacagagagactgact tagaggtcaataaatttgatgatgctcagagaaaatcgatcattaaaaaatcacagaatctcaactctagatttggtcat ggtaaaacccagttcttatga |
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Protein
| Protein ID | pfu_aug1.0_26578.1_40630.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26578.1_40630.t1 MEDSNVIGPSLPSHLSNRNNEYNVDSSSIGPNIPNYTSGSYNEESDSEEDYVGPRPSEMTHGDTDHITAAEFEARSRRMK DRIDGKTSGEDKSVKRESWMTVLPDCLGQNIGLQARSFRVQQGPDMSDRSAWTDTPADRERKLKEQSDGGRKRKHEESKK SSRDTKLAKEIEQYNKSKRSESLLDLHQKKLKSKQKEEEDKPAVRRPFDRETDLEVNKFDDAQRKSIIKKSQNLNSRFGH GKTQFL |
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