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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2661.1_58994
Locus scaffold2661.1 : 1 ... 10256 : +
To GenomeBrowser scaffold2661.1:1..10256
Genes list of scaffold scaffold2661.1
Synonym pfu_aug2.0_798.1_27791

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2661.1_58994.t1 1 1 Cache_1 140 187 5.7e-06 25.7 9.2e-10 1.4e-05 24.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2661.1_58994.t1 gi|242016520|ref|XP_002428835.1| predicted protein [Pediculus humanus corporis] 4.0e-21

Transcript
Transcript IDpfu_aug1.0_2661.1_58994.t1
Definition-
>pfu_aug1.0_2661.1_58994.t1
ttggtcaatctatacagagccagcaatccggacagccaaccttctcaccgatattcttattacaaacaatggtactctag
attcgctctctgatgatatgtttttcaccttagtcagaaataacataagaggggcatctgtcatatttggatccgcaatt
gctattgaactaggggtttatgggaaatattcaaaattttctccatacgcatatgaaaagaatggtaccatattttcgca
tgatattgccatcaattatgactatctgaatggagaaacagagtggtatgaagctgtgaagataaagacatgggatggtg
tacatttcgctgcagacgaaataaactatagatcaggtaatgtgttactacccatggaaattgtatctcgccccactgcg
gtgctatcagacggacactggaccaagccttactacgactgtgggggaggggatatatggatggtcacatactcctcacc
aatatttgacatcaatgatacaaccaacgaagcagaattcaggggcgtagctactattgacattgagctaaccaatatcg
acattaatcagtgtgagccggatgaaacttctagtggcgctctggacatctttcgtggaactcataaatgtcaacctaca
actacgcatcatttaagaacagataaatctgcagcttggaccagacgtgcaagtttctggtacttaaccctcgtcactga
tcctaaatctaaacaatgttatatgaccaatgagtgtgatagttatttaaaagttcaaaaaatgtaccgaaagacgtag

Protein
Protein IDpfu_aug1.0_2661.1_58994.t1
Definition-
>pfu_aug1.0_2661.1_58994.t1
WSIYTEPAIRTANLLTDILITNNGTLDSLSDDMFFTLVRNNIRGASVIFGSAIAIELGVYGKYSKFSPYAYEKNGTIFSH
DIAINYDYLNGETEWYEAVKIKTWDGVHFAADEINYRSGNVLLPMEIVSRPTAVLSDGHWTKPYYDCGGGDIWMVTYSSP
IFDINDTTNEAEFRGVATIDIELTNIDINQCEPDETSSGALDIFRGTHKCQPTTTHHLRTDKSAAWTRRASFWYLTLVTD
PKSKQCYMTNECDSYLKVQKMYRKT

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