Gene
Gene Model ID | pfu_aug1.0_2661.1_58995 |
---|---|
Locus | scaffold2661.1 : 10716 ... 24040 : + |
To GenomeBrowser | scaffold2661.1:10716..24040 |
Genes list of scaffold | scaffold2661.1 |
Synonym | NA |
Manual annotation
Study field | other |
---|---|
Gene name | hypothetical protein |
Description | Domain 7tm_3 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2661.1_58995.t1 | 1 | 1 | 7tm_3 | 23 | 179 | 4.2e-15 | 55.7 | 3.6e-19 | 5.4e-15 | 55.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2661.1_58995.t1 | gi|291231008|ref|XP_002735460.1| | 1.0e-27 |
Transcript
Transcript ID | pfu_aug1.0_2661.1_58995.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2661.1_58995.t1 atggatctattctatacgctccttggaaatgcaatgtttgattttcatccatcaacaattcttgtaatctccgtaatttt tcgtgttggaactttcaaacgtgtccatcttccggacaaagttgttcttcagcgcatgctccctgctgtgggaataatga ctgcttatctggtggcatggacggcgaccgatacggaaagaacgataactcttactacctcagacgacaagctcaaattc aaaatttgttctgcaagctggtggtactacgccatacacggaggtgaagctttattgttgctgttcggagtctatctgtg ttttactgtacgtaaagcacctgcaaatttcaacgaaagtaaatacatcacgtggtctgtgtacaacgccatcatcctcg ggagttttatccttattatcacacgttttgtgttatcctctggtccggatttggtttacgttttatcgttccttcagatc caagttgttgtcacgattaccatgtcccttatctttgttccaaagttttatacgttgcttagaaagaaggactatgacaa cacacgtaaggacagcctccccaccatcgcccaatcatcaatcgggggtcgcttcaaacacctccctactaccaacatgt cgacagtcagagggcgtggctgtaattccgtcgccgtgcaggtacccgatttctccgaaaatacgctaaaggttccgtcc agagtcaagtctgggagaaaactttcctcgaaagtgtcacccatggaaccggaaatctcgcctgcctcgccgccatga |
Protein
Protein ID | pfu_aug1.0_2661.1_58995.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2661.1_58995.t1 MDLFYTLLGNAMFDFHPSTILVISVIFRVGTFKRVHLPDKVVLQRMLPAVGIMTAYLVAWTATDTERTITLTTSDDKLKF KICSASWWYYAIHGGEALLLLFGVYLCFTVRKAPANFNESKYITWSVYNAIILGSFILIITRFVLSSGPDLVYVLSFLQI QVVVTITMSLIFVPKFYTLLRKKDYDNTRKDSLPTIAQSSIGGRFKHLPTTNMSTVRGRGCNSVAVQVPDFSENTLKVPS RVKSGRKLSSKVSPMEPEISPASPP |