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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_26655.1_69799
Locus scaffold26655.1 : 1 ... 7819 : -
To GenomeBrowser scaffold26655.1:1..7819
Genes list of scaffold scaffold26655.1
Synonym pfu_aug2.0_692.1_07804

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_26655.1_69799.t1 gi|348508364|ref|XP_003441724.1| PREDICTED: acetolactate synthase-like protein-like [Oreochromis niloticus] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_26655.1_69799.t1
Definition-
>pfu_aug1.0_26655.1_69799.t1
gtagatacaaaaacaaagaggaatggaggtgacttagtggctgatgtattgaaggtaacgacagtgtttgcagctgatgc
tgtagccaggatgtctgggacagtgggcgtggctgctgtcactgcaggaccaggtgctgtagcagatttcaggttaagct
atggccgtacactgagtaggaaatcaaaaatcattgccataaatagagataaagtccaacttttaaagaattctgacatg
ttctggaaaccaactatagctgtggaatctgacgtagctagttttatggtcagtgtggccaacggtctgaaaggttacaa
atgcgacgcagaatgggtacaaaaactcaaacaaaaagatgacgagaaagaaaaagctaataggcagaaggcagaagagg
tgacggatgtccacctgaatccactgaagattttacacatagcggaagacgtgatgtcagacgacgctataatggtagct
gatggcggagactttgtcgctacggcagcttacattctacg

Protein
Protein IDpfu_aug1.0_26655.1_69799.t1
Definition-
>pfu_aug1.0_26655.1_69799.t1
VDTKTKRNGGDLVADVLKVTTVFAADAVARMSGTVGVAAVTAGPGAVADFRLSYGRTLSRKSKIIAINRDKVQLLKNSDM
FWKPTIAVESDVASFMVSVANGLKGYKCDAEWVQKLKQKDDEKEKANRQKAEEVTDVHLNPLKILHIAEDVMSDDAIMVA
DGGDFVATAAYIL

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