Gene
| Gene Model ID | pfu_aug1.0_26826.1_33579 |
|---|---|
| Locus | scaffold26826.1 : 1 ... 7774 : + |
| To GenomeBrowser | scaffold26826.1:1..7774 |
| Genes list of scaffold | scaffold26826.1 |
| Synonym | pfu_aug2.0_89.1_30178 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_26826.1_33579.t1 | 4 | 1 | Laminin_EGF | 94 | 138 | 4.8e-16 | 58.4 | 4.1e-05 | 0.61 | 10.0 |
| pfu_aug1.0_26826.1_33579.t1 | 4 | 2 | Laminin_EGF | 146 | 196 | 4.8e-16 | 58.4 | 1.6e-10 | 2.3e-06 | 27.4 |
| pfu_aug1.0_26826.1_33579.t1 | 4 | 3 | Laminin_EGF | 199 | 243 | 4.8e-16 | 58.4 | 1.9e-10 | 2.8e-06 | 27.1 |
| pfu_aug1.0_26826.1_33579.t1 | 4 | 4 | Laminin_EGF | 246 | 275 | 4.8e-16 | 58.4 | 5.0e-06 | 0.074 | 13.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_26826.1_33579.t1 | gi|221104957|ref|XP_002161535.1| | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_26826.1_33579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26826.1_33579.t1 attgatgaagtaaaagttaagagcactggagcaaaacctaatatgataaaaatagaacttatcagagaaaacagcagatc tgaagagtatgtggaagccggcactcgacttgtgaacgattacttcactctggatctacgtggcaatttaaccctcggta caacttcaaaccgatcaaccgtggagagcatggtagcaaagagcatcaagatcacattctccggaagagcagacagtcag acgtattacgaaataccggaaatacaaattagaggaagatgttactgcagtggtgtagctacaagctgcacacgtaattc cagtacacataactacacatgtaatggatgtacaattgacagtacaggatcaagatgtgagaactgtgtaacagggaaat acatatcagaggaagattttggttgtcgaacaagttgtagttgtttttcagcaggcacggcaggttctccaaatgtttgt gaagtggacgggggtcagtgtaattgtaagaagaatgtagaattacagcagtgtaacacatgtaagttcctaacgtacaa cctgacgagctctaacccaaatggatgtcagaactgtagctgtgacagatacggaagttctagctgtaatgcagctactg gagtctgtagctgcaaaaataatgtacagcccggtaattgtgcatcatgtattccaaactattttggaagaaaccgacca ggaggctgtgtaccttgtggctgtaatgcaccaggcacggaacgtacaaagacggaaacatgcgaagagttcacaggaat ctgtgcatgtaaacagaatgttcaag |
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Protein
| Protein ID | pfu_aug1.0_26826.1_33579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_26826.1_33579.t1 IDEVKVKSTGAKPNMIKIELIRENSRSEEYVEAGTRLVNDYFTLDLRGNLTLGTTSNRSTVESMVAKSIKITFSGRADSQ TYYEIPEIQIRGRCYCSGVATSCTRNSSTHNYTCNGCTIDSTGSRCENCVTGKYISEEDFGCRTSCSCFSAGTAGSPNVC EVDGGQCNCKKNVELQQCNTCKFLTYNLTSSNPNGCQNCSCDRYGSSSCNAATGVCSCKNNVQPGNCASCIPNYFGRNRP GGCVPCGCNAPGTERTKTETCEEFTGICACKQNVQ |
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