Gene
Gene Model ID | pfu_aug1.0_26875.1_55184 |
---|---|
Locus | scaffold26875.1 : 1226 ... 12453 : + |
To GenomeBrowser | scaffold26875.1:1226..12453 |
Genes list of scaffold | scaffold26875.1 |
Synonym | pfu_aug2.0_1589.1_31781 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_26875.1_55184.t1 | 1 | 1 | 7tm_1 | 61 | 331 | 1.4e-31 | 109.5 | 1.1e-35 | 1.6e-31 | 109.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
trochophore | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_26875.1_55184.t1 |
---|---|
Definition | - |
>pfu_aug1.0_26875.1_55184.t1 atggaagataatgtgacgtcagacaacgtgtcctcggaggcgcccgcctgtcacgtatggcttaaggatgctttacctaa tttatacaatgctacattagaccaagtgaattctcagcttgtccgacggaatataggaggaatccttcttttatcagccc tgatcatcgtggggctaataggtaatgtacatgtaatgtggatctacctacgtcaattcaaaacttctaattatcgtgtg tacgtattgtggttagctatactggacatacttaactgtacagttgttgcaccgatggtgatttcgtatttatttttccc ggtacagtttccttcgctactttactgcaaactcttccgttttgtgttatacgtcatggcgatttcgtcgacgtcatcgc ttatcgcaattgcgattgaccgctacagaaaagtgtgcaatcctctcggtaaacagttcagcattaaaaaggcgaagttt ctgtgtgtgctaagtctttgtgtaggaataggcatgtcatggcccgcgcccatcatgtatggaatgagccacgccccaac aggggtcccgggactcgagggatatagatgttttaccgaggactacttcaaaacaacatactatcaaaccatatttaacg caatacttggactttattttttcgtcgtatcttccacgttggtatttgtttacatacgtatcgggaagcatatcaagacg catcagaagtttcaaaacaacattcgcaagatgtcggtacgtaacccggaagaactgaaagcggtgacgaacgccggttc caacaagtcaaccgtcaccctctgtgttgttaccatagcttacatacttagtgctctaccccatcatatactagctacgc tcatcttccttaagaaggactttgactgctccctgagtctggtgtcggctcagctttattacaccttcatatggtcgtat tttgtcaattctgttgtgaacccgtttatttatggaatacgagacaagaagttcagattcgccgtcaaacggctatacag aaagaccattgatagccctgctccccctgtgacgacagtagcttactga |
Protein
Protein ID | pfu_aug1.0_26875.1_55184.t1 |
---|---|
Definition | - |
>pfu_aug1.0_26875.1_55184.t1 MEDNVTSDNVSSEAPACHVWLKDALPNLYNATLDQVNSQLVRRNIGGILLLSALIIVGLIGNVHVMWIYLRQFKTSNYRV YVLWLAILDILNCTVVAPMVISYLFFPVQFPSLLYCKLFRFVLYVMAISSTSSLIAIAIDRYRKVCNPLGKQFSIKKAKF LCVLSLCVGIGMSWPAPIMYGMSHAPTGVPGLEGYRCFTEDYFKTTYYQTIFNAILGLYFFVVSSTLVFVYIRIGKHIKT HQKFQNNIRKMSVRNPEELKAVTNAGSNKSTVTLCVVTIAYILSALPHHILATLIFLKKDFDCSLSLVSAQLYYTFIWSY FVNSVVNPFIYGIRDKKFRFAVKRLYRKTIDSPAPPVTTVAY |