Gene
| Gene Model ID | pfu_aug1.0_2688.1_30216 |
|---|---|
| Locus | scaffold2688.1 : 1 ... 13835 : - |
| To GenomeBrowser | scaffold2688.1:1..13835 |
| Genes list of scaffold | scaffold2688.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2688.1_30216.t1 | 1 | 1 | RhoGEF | 96 | 175 | 2.0e-13 | 50.5 | 9.1e-17 | 3.4e-13 | 49.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2688.1_30216.t1 | gi|301606566|ref|XP_002932909.1| | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_2688.1_30216.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2688.1_30216.t1 atgccacagaagtttaccctccttaaagattttgtggataaagctaatgacacagaagtacacaaaggagaggttgtaga agtactggacaagatagatggtgaccactggctagtcaggaccggtcaagctggaaatcagatctgctatgtggcgccat ctatccttgaaccgttggatgaaaagacagtagagagaccatctgcttttgatggtaccagacgcaagtcaagccgtgta gacgacgaaatggtgaagaagattaaggagaaacagaagagtcttattcaggacgtagttgacacggaaactgattatgt ctgtgacctcaaagatttgattgacaactacattcgaccaatcagaaaggaggatttcccccagactctgaaggccaatg aaaacgatattttctctaacttactacaaatctacaaatttcatcacaaagttttgttaccagagttaacagaatgtagt ggggaaccagatgaagtggctaatgttttcctgaaaaaggagaaggttttacttgacaaagacacagaggaagaagaaga agcggccttacatcatgtgtttgtatttggtgaaaacgtcctcatagcgaaggaaacaggagaaatgtccgagtctgaca ttcctacgttacagttcgaccaaattcttcctctcgccgggacgtcgttgttgtcgtcgtcgtcgtccgtagacaaaaca ttaacctatgctatatctcttgaactttaa |
|
Protein
| Protein ID | pfu_aug1.0_2688.1_30216.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2688.1_30216.t1 MPQKFTLLKDFVDKANDTEVHKGEVVEVLDKIDGDHWLVRTGQAGNQICYVAPSILEPLDEKTVERPSAFDGTRRKSSRV DDEMVKKIKEKQKSLIQDVVDTETDYVCDLKDLIDNYIRPIRKEDFPQTLKANENDIFSNLLQIYKFHHKVLLPELTECS GEPDEVANVFLKKEKVLLDKDTEEEEEAALHHVFVFGENVLIAKETGEMSESDIPTLQFDQILPLAGTSLLSSSSSVDKT LTYAISLEL |
|