Gene
| Gene Model ID | pfu_aug1.0_2695.1_15893 |
|---|---|
| Locus | scaffold2695.1 : 1 ... 16579 : + |
| To GenomeBrowser | scaffold2695.1:1..16579 |
| Genes list of scaffold | scaffold2695.1 |
| Synonym | pfu_aug2.0_38.1_26705 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2695.1_15893.t1 | 2 | 1 | Sugar_tr | 65 | 115 | 2.3e-09 | 36.3 | 1.6e-08 | 0.00012 | 20.8 |
| pfu_aug1.0_2695.1_15893.t1 | 2 | 2 | Sugar_tr | 107 | 185 | 2.3e-09 | 36.3 | 1.7e-07 | 0.0013 | 17.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2695.1_15893.t1 | gi|327274294|ref|XP_003221913.1| | PREDICTED: solute carrier family 22 member 13-like isoform X2 [Anolis carolinensis] | 4.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2695.1_15893.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2695.1_15893.t1 actgatacaaattcatcattagagataagtatccccaagtcagcagatggagagtatgagaaatgtttgatgtatgatcc catggacctaaacagtacggtaaaatgtcaagatggttggacttatggagaggaatttgattctaccatcatgtcagatt ggaatcttgtatgtgacaaagattacatggtagatctctcctctactatatacatggcaggcagtgctgcaggtgctctc tttctcacaccctttgctgacgtgtttggaagaaagtacattattctctccttccttatcatccaaggagccattggttt tggtacagcatttgcagatgattacatattgttcacagttctcagctttctcccagagtccataccttggcttgtttcaa agaaaaagtatactgaagtgaaaaagacagcaaagtttgcagccaaagttaatgggaaaacactaccagacagtcttttt gacccacagtatgatagcgatacagaattttccgagcctccccatagcagtgatgagttatatagtggtgcagataccgc acaacagaagaaatatactatcttagacttgtttaggacacctaggataagacgttacacactggtgatgttttacctat ggacaggttttcaaattcaaaactgtgtattctttgactcctgccatgatagaatgctgccatga |
|
Protein
| Protein ID | pfu_aug1.0_2695.1_15893.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2695.1_15893.t1 TDTNSSLEISIPKSADGEYEKCLMYDPMDLNSTVKCQDGWTYGEEFDSTIMSDWNLVCDKDYMVDLSSTIYMAGSAAGAL FLTPFADVFGRKYIILSFLIIQGAIGFGTAFADDYILFTVLSFLPESIPWLVSKKKYTEVKKTAKFAAKVNGKTLPDSLF DPQYDSDTEFSEPPHSSDELYSGADTAQQKKYTILDLFRTPRIRRYTLVMFYLWTGFQIQNCVFFDSCHDRMLP |
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