Gene
| Gene Model ID | pfu_aug1.0_2697.1_59003 |
|---|---|
| Locus | scaffold2697.1 : 42596 ... 45961 : + |
| To GenomeBrowser | scaffold2697.1:42596..45961 |
| Genes list of scaffold | scaffold2697.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2697.1_59003.t1 | 1 | 1 | FAM124 | 3 | 216 | 0.0 | 163.7 | 0.0 | 0.0 | 163.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2697.1_59003.t1 | gi|156380673|ref|XP_001631892.1| | predicted protein [Nematostella vectensis] | 3.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2697.1_59003.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2697.1_59003.t1 atgaaaataatctctccattgacgggatggattgatccctcatttaggttggtaaatgttctcgaaaaagaagtatgctc aggaaaatgtgacaacgaacagagagaaaagaatgcagacctagaatacctccgaattccgtccttaagtgtgatgtctt tcttaacagaaaggggagaagaatgtgcaactgatgtgcagaaacatttcttgaaaaaaccatggaagtttcaccacaaa gtggaactatacagtcgccgttcaccagaacatgccgccgcttgccaagaattcttcggaatagcagacgacatgccact ttggtccgtatgtccgattcattatggcaatgaacactttcgtttccttatttacgtccggaattttcaaaagatggttg aattttatcgagtgataacggacgtagaaatggaaagtaacaagccaggattttgtatttttcagctttatactcaacaa ggtttggatatccaacttgccctgaaatactcaaaacatatcgaaccacaccctgtttccaatgccaatcttgtctttaa ggttaagaacatagatgtcattcaatcctctttagggtgtgacattcagaaagtacacgaggatacttactcaatacaag accccgactggaaatag |
|
Protein
| Protein ID | pfu_aug1.0_2697.1_59003.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2697.1_59003.t1 MKIISPLTGWIDPSFRLVNVLEKEVCSGKCDNEQREKNADLEYLRIPSLSVMSFLTERGEECATDVQKHFLKKPWKFHHK VELYSRRSPEHAAACQEFFGIADDMPLWSVCPIHYGNEHFRFLIYVRNFQKMVEFYRVITDVEMESNKPGFCIFQLYTQQ GLDIQLALKYSKHIEPHPVSNANLVFKVKNIDVIQSSLGCDIQKVHEDTYSIQDPDWK |
|