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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_26972.1_55187
Locus scaffold26972.1 : 593 ... 4792 : +
To GenomeBrowser scaffold26972.1:593..4792
Genes list of scaffold scaffold26972.1
Synonym pfu_aug2.0_9170.1_03009

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_26972.1_55187.t1 1 1 UPF0029 91 169 8.0e-07 28.7 9.8e-11 1.4e-06 27.9

Transcript
Transcript IDpfu_aug1.0_26972.1_55187.t1
Definition-
>pfu_aug1.0_26972.1_55187.t1
atgcagtacctaagcgttgtcatgacgagtcgacatgtcctagtggataaagtgcgaggacatcggaatgcctatgacga
catgactatttttgtgaagcggataatctggtcacgggaaaatacaaaagtcttcaaagggaagatagttctcccaaatg
gtgaaacctatcaagatgaagtaccgaaactatcgtgtgcggatattctcaaatcgtcatcttccgggaatgccgcggta
acagaaaatgtaacactgaaagagattggctgtaacgttacatgtaaagacgaagtatctaccttgtacaggaaggccaa
ccttgaccccgatggcgcaagtgcaaatcataatatactcgtgtaccgattaaaaaatgacagtggctttgtacatgaaa
tttaccatgacgacggtgactttggatccgggcgtcgcctgcttggctttatgaggaaaaacaaaatattgaatcgcgcc
ttcgttatctcgatgtggacagatggaaagtttcctgattacagtcgctctcaaaagatgcaaaacttaatcatcgacat
aacaaacgaactagacaatgataaagatgaatacattgattgtgacaccgatgacagcgatgaaaatgaactgtcatga

Protein
Protein IDpfu_aug1.0_26972.1_55187.t1
Definition-
>pfu_aug1.0_26972.1_55187.t1
MQYLSVVMTSRHVLVDKVRGHRNAYDDMTIFVKRIIWSRENTKVFKGKIVLPNGETYQDEVPKLSCADILKSSSSGNAAV
TENVTLKEIGCNVTCKDEVSTLYRKANLDPDGASANHNILVYRLKNDSGFVHEIYHDDGDFGSGRRLLGFMRKNKILNRA
FVISMWTDGKFPDYSRSQKMQNLIIDITNELDNDKDEYIDCDTDDSDENELS

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