Gene
| Gene Model ID | pfu_aug1.0_27.1_36238 |
|---|---|
| Locus | scaffold27.1 : 11660 ... 26145 : - |
| To GenomeBrowser | scaffold27.1:11660..26145 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug2.0_1891.1_05302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27.1_36238.t1 | 1 | 1 | Proteasome_A_N | 31 | 53 | 1.2e-14 | 53.3 | 2.6e-18 | 2.0e-14 | 52.5 |
| pfu_aug1.0_27.1_36238.t1 | 1 | 1 | Proteasome | 56 | 240 | 1.3999e-42 | 145.1 | 0.0 | 2.29953e-42 | 144.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27.1_36238.t1 | gi|346469211|gb|AEO34450.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_27.1_36238.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27.1_36238.t1 atgcattttttttatcaggaaaggcgacactcgtcctctccgtttaatttcctcaatttagaggtttaccggcttgcaat gtctcgaagatatgactcccgtacaacaatcttctccccagaggggagattatatcaggttgaatatgccatggaagcca taggccatgccggcacatgtcttggcattcttgcaaatgatggtgttctcttggcagcagaaagacggaatacaaacaaa ttgttggatgaagtgtcatattctgagaagatctacaagctatatgatgacatggtgtgcagtgtagccggtatcacatc agatgctaacgtcctcacaaatgaactacgtcttattgcacagagatctcttgaaccgtttgccggatctctttcatatt ttagtatgttgttgtttatgacccgaaggttttgcatcaccttgacccaaggaaagagaccatttggagtttctatatta tacatgggttgggataaacattatggctttcagttataccagagtgatcctagtggtaattatggtggatggaaagctac atgtataggaaataacagcgctaatgcagtatcaatgttgaagcaagattacaaagagggagaagtgaaactttcagatg ctttacaacttgcaatcaaagttctcagtaaaacactggatatgacaaagctcacaccagaaaaagttgagattgccacc ctgaccagagaggagggaaagacaaagatgaccatactgcagtcagaggaggtggagaaactcatcaagaaacatgagga agaagaagctaagacagaaaaagccaagtcatcataa |
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Protein
| Protein ID | pfu_aug1.0_27.1_36238.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27.1_36238.t1 MHFFYQERRHSSSPFNFLNLEVYRLAMSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNTNK LLDEVSYSEKIYKLYDDMVCSVAGITSDANVLTNELRLIAQRSLEPFAGSLSYFSMLLFMTRRFCITLTQGKRPFGVSIL YMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSANAVSMLKQDYKEGEVKLSDALQLAIKVLSKTLDMTKLTPEKVEIAT LTREEGKTKMTILQSEEVEKLIKKHEEEEAKTEKAKSS |
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