Gene
| Gene Model ID | pfu_aug1.0_27007.1_40650 |
|---|---|
| Locus | scaffold27007.1 : 1 ... 18198 : + |
| To GenomeBrowser | scaffold27007.1:1..18198 |
| Genes list of scaffold | scaffold27007.1 |
| Synonym | pfu_aug2.0_2693.1_12254 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27007.1_40650.t1 | 1 | 1 | Hus1 | 20 | 225 | 0.0 | 227.8 | 0.0 | 0.0 | 227.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27007.1_40650.t1 | gi|238231719|ref|NP_001154046.1| | Checkpoint protein HUS1 [Oncorhynchus mykiss] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_27007.1_40650.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27007.1_40650.t1 caatgaatatcttatgttaaaatatgtcaggaagcgggggctgacctactactaccgtagtactttcagcccgtgcaaag atatttaccgagttattgggacattatccaagctgattaagacatgtgtactgcgtataacgcctggaaattggtacttc attctgtcagagagactggttgacgggggcgtacagatatggtgtgaattaccccagggtcatttctttgatgagtacgc catggagggcgtgtcacaggaagctaacgagatctacctggagctgtccccggaaaatcttcttaaagccttgaaaactg cacagaacgcaaagtggatcaaaataaaactgaccaaaaaacatgcgccatgtctcacagtggaggttgatctgcccaca atgacgtcccacactaggacagtgacccacgatattcctgtagttgttgtaccacgcagacagtgggctgacttcgaaga accggaactaccacagtttgatgcaaccattgcaatgccacaaatgaagttgttgaggaatattgttgataaaatgaaaa gtctcagtaattacatggttttgtcggccaacaatagtggagaaatgaagttgatggtggaaacagagatggcctctgtc agtacattcttcagagatctccctaaccctgtcacagatatatattga |
|
Protein
| Protein ID | pfu_aug1.0_27007.1_40650.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27007.1_40650.t1 NEYLMLKYVRKRGLTYYYRSTFSPCKDIYRVIGTLSKLIKTCVLRITPGNWYFILSERLVDGGVQIWCELPQGHFFDEYA MEGVSQEANEIYLELSPENLLKALKTAQNAKWIKIKLTKKHAPCLTVEVDLPTMTSHTRTVTHDIPVVVVPRRQWADFEE PELPQFDATIAMPQMKLLRNIVDKMKSLSNYMVLSANNSGEMKLMVETEMASVSTFFRDLPNPVTDIY |
|