Gene
| Gene Model ID | pfu_aug1.0_270102.1_57611 |
|---|---|
| Locus | scaffold270102.1 : 1 ... 587 : + |
| To GenomeBrowser | scaffold270102.1:1..587 |
| Genes list of scaffold | scaffold270102.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to NCBI AEA30980.1 (Crassostrea gigas) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_270102.1_57611.t1 | 2 | 1 | EF-hand_1 | 1 | 28 | 2.5e-21 | 73.2 | 1.3e-12 | 1.8e-09 | 36.1 |
| pfu_aug1.0_270102.1_57611.t1 | 3 | 1 | EF-hand_6 | 1 | 29 | 9.5e-16 | 56.2 | 8.3e-13 | 1.1e-09 | 37.3 |
| pfu_aug1.0_270102.1_57611.t1 | 1 | 1 | EF-hand_7 | 2 | 61 | 3.8e-16 | 58.9 | 3.7e-19 | 5.0e-16 | 58.5 |
| pfu_aug1.0_270102.1_57611.t1 | 2 | 1 | EF-hand_5 | 2 | 25 | 2.9e-13 | 48.4 | 1.8e-10 | 2.5e-07 | 29.7 |
| pfu_aug1.0_270102.1_57611.t1 | 1 | 1 | EF-hand_9 | 4 | 63 | 3.1e-09 | 36.6 | 2.6e-12 | 3.5e-09 | 36.4 |
| pfu_aug1.0_270102.1_57611.t1 | 2 | 1 | EF-hand_8 | 5 | 26 | 1.7e-16 | 59.5 | 3.1e-05 | 0.041 | 13.4 |
| pfu_aug1.0_270102.1_57611.t1 | 2 | 2 | EF-hand_8 | 13 | 63 | 1.7e-16 | 59.5 | 4.7e-17 | 6.4e-14 | 51.3 |
| pfu_aug1.0_270102.1_57611.t1 | 3 | 2 | EF-hand_6 | 33 | 42 | 9.5e-16 | 56.2 | 0.86 | 1200.0 | -0.1 |
| pfu_aug1.0_270102.1_57611.t1 | 2 | 2 | EF-hand_1 | 36 | 63 | 2.5e-21 | 73.2 | 6.9e-13 | 9.2e-10 | 37.1 |
| pfu_aug1.0_270102.1_57611.t1 | 3 | 3 | EF-hand_6 | 37 | 63 | 9.5e-16 | 56.2 | 1.0e-06 | 0.0013 | 18.3 |
| pfu_aug1.0_270102.1_57611.t1 | 2 | 2 | EF-hand_5 | 37 | 61 | 2.9e-13 | 48.4 | 3.6e-08 | 4.8e-05 | 22.5 |
Transcript
| Transcript ID | pfu_aug1.0_270102.1_57611.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_270102.1_57611.t1 aattcaaagaagcattcagtttgttcgataaggatggagatgggacgattactaccaaagagcttgggactgtgatgaga tcattgggacagaatccgacagaggcagaattacaggacatgatcaatgaagtggatgctgatggaaatggcaccattga cttcccagaattcttaacgatgatggcaaagaaaatgaaggacgccgactcagaagaggaactcagag |
|
Protein
| Protein ID | pfu_aug1.0_270102.1_57611.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_270102.1_57611.t1 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKMKDADSEEELR |
|