Gene
| Gene Model ID | pfu_aug1.0_2703.1_01206 |
|---|---|
| Locus | scaffold2703.1 : 23679 ... 49005 : - |
| To GenomeBrowser | scaffold2703.1:23679..49005 |
| Genes list of scaffold | scaffold2703.1 |
| Synonym | pfu_aug2.0_194.1_13777 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2703.1_01206.t1 | 2 | 1 | tRNA-synt_2d | 225 | 294 | 1.7e-25 | 89.6 | 9.2e-23 | 2.7e-19 | 69.3 |
| pfu_aug1.0_2703.1_01206.t1 | 2 | 2 | tRNA-synt_2d | 298 | 322 | 1.7e-25 | 89.6 | 3.0e-07 | 0.00089 | 18.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2703.1_01206.t1 | gi|115760293|ref|XP_786462.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2703.1_01206.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2703.1_01206.t1 atgactaaaatgcgtgacgtcggacaccatgacgtcactgtctggtttaaaaatcgaagagcaaaattcagaaagaagca gaaatcacttaagccctgtaaggatcaatctgccgagactacagtgacagaaagcaacggtcaaaagactaaagagaaaa ctgacgatgaagttgtagatgttgtcgatatcataaagacagaacaagtcaccaacaaacattgggagcttacagaggag gggaaggatgtggcgaagaatggtagttacgaagccagggtgtttaacgctatacctgctgggggaattgcacaggcaga aatcatgaaatcagtcccaaatgccaaagttggtttcagcaaagccatgcaggctggttggattgtactagacaaaagtt cagaaggtggccctaaagtgcagaggaaggttgaaaatattgaagattctgttcaacaatgtgtatctcaatttgcgaca atggatctcagtggaatcacagatgcacaaaaagcagaatacaagaaacgaaaacttgtcacagaagtgaaagttgttag ttaccgaataagtaagggagagaacttcacattaacaatcagcaaaccagaagtagatcttacaacaaaaatgattcaga gtggatcatggagaacaaaaactttcaaggagtataactttgatgcgttaggggtccctccccaagctggtcatcttcat cctctactgaaagtcagggctgaatatagacagatcttcttagaaatgggattcacagagatgcctaccaatagattcgt agagagttgtttctggaatttcgatgctttgttccaacctcagcaacatccggcccgtgatgctcatgatactttcttca tctcaggtttgaagaaatgggtcgagattggcaattctgggattttcagacctgaaatgttgatacccatgggacttcca aaagataccaacaatgataaagtataa |
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Protein
| Protein ID | pfu_aug1.0_2703.1_01206.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2703.1_01206.t1 MTKMRDVGHHDVTVWFKNRRAKFRKKQKSLKPCKDQSAETTVTESNGQKTKEKTDDEVVDVVDIIKTEQVTNKHWELTEE GKDVAKNGSYEARVFNAIPAGGIAQAEIMKSVPNAKVGFSKAMQAGWIVLDKSSEGGPKVQRKVENIEDSVQQCVSQFAT MDLSGITDAQKAEYKKRKLVTEVKVVSYRISKGENFTLTISKPEVDLTTKMIQSGSWRTKTFKEYNFDALGVPPQAGHLH PLLKVRAEYRQIFLEMGFTEMPTNRFVESCFWNFDALFQPQQHPARDAHDTFFISGLKKWVEIGNSGIFRPEMLIPMGLP KDTNNDKV |
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