Gene
| Gene Model ID | pfu_aug1.0_2703.1_01209 |
|---|---|
| Locus | scaffold2703.1 : 86109 ... 106185 : - |
| To GenomeBrowser | scaffold2703.1:86109..106185 |
| Genes list of scaffold | scaffold2703.1 |
| Synonym | pfu_aug2.0_10706.1_22960 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2703.1_01209.t1 | 2 | 1 | Peptidase_M1 | 83 | 431 | 0.0 | 372.6 | 0.0 | 0.0 | 369.8 |
| pfu_aug1.0_2703.1_01209.t1 | 2 | 1 | Peptidase_MA_2 | 357 | 422 | 6.0e-13 | 48.9 | 3.2e-16 | 1.2e-12 | 48.0 |
| pfu_aug1.0_2703.1_01209.t1 | 2 | 2 | Peptidase_M1 | 431 | 448 | 0.0 | 372.6 | 0.0054 | 20.0 | 4.1 |
| pfu_aug1.0_2703.1_01209.t1 | 1 | 1 | ERAP1_C | 471 | 653 | 2.9e-26 | 92.4 | 1.7e-29 | 6.5e-26 | 91.3 |
| pfu_aug1.0_2703.1_01209.t1 | 2 | 2 | Peptidase_MA_2 | 562 | 578 | 6.0e-13 | 48.9 | 0.76 | 2800.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2703.1_01209.t1 | gi|47208844|emb|CAF93866.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2703.1_01209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2703.1_01209.t1 atgtcttcgaagactaaaacatacgttaacaaaagagtggtttatgcttgcgtgttcttaatgttagcacttccagtgtt agttggagttcttgtatggtactttacgaaaaatgactgtgatgcaaaattgaacaataatccaccgtcggctgctgctg ctgcaaatactggcgggaaactttctacaaaattgccggaagtgacgacaaggaaaccatcagcagacgagccatggttg tatccgagactcacacgtgatgttttgccaagtcattacgacatcactctttatccaaatttttatggtgataatggcgt atttgaagggaatgaaacagtagagcttgacgtgaaaaaggatacaagatttgtgttaattcatatcaatttcttggaca tatcacagacatcacttcggttcaaggacacgtcacaaagtatatcatttaaaacagcatggttctatgagaaaaatcag tattgggtaatagaatgcgatcagactttggcgaaaggttccgttttggttttagaccttacattttccggatcattgac gagagcaatagtcggattttacaaaagtagctatatcaattcgattacaaaagaagaaagacatctagcaacgtcgaaat ttgagcctgtaaatgcaagaagagcgtttccatgttttgatgaaccgaatatcaaggcaaactacacggtgcatttggtt catagaccgggttacatagcactgtcaaacatgcctgatacggatacagtcccctgggaacacgaaaattcactgctcat cactcactttgagcggtcggtagagatgagcacatatcttgtttgtttcacagtctgtgatttcacttacctcaacgata ctacaaagtttggaactccaataagagcctttgcaactccagacagagtaaatcagacagtatttgccttaatggttgct aagaacgccatggagttatatgaagaatacttcaacgtaaaatacccgcttccgaaacaagatttgatagcaataccaga ttttgtgtcaggagctatggagcactggggtcttatctccttcagggaaacgaattttctgtatgacgaggaagaggcat ctcctgcaaaccagcagagagtaaatatagttgtttctcacgaagtatctcatcagtggtttggtaatcttgtcacaatg gattggtgggatgatttgtggctgaatgagggctttgccagcttcatcgaatacctcggtgcaaattactcggagccttc atggaaaatggtagacaaccctgaccaaatcaacgaggttttcgatggtataacatatagtaagttatcaatggtacatt ttcataaattatgtgacatcatcgagtcagactggagacgtctggttgaaccagactcaaatcgaagcttaatgagaaca aacatgatttccttggcgtgtggaatggcggacaaagattgtctagacaatgctactagaaaatttagagactggttaga taatggcataagtgtatctccgaacattcgctccctggtgtacagatatggtatgcagagcgggggatcggcagaagact gggataaactatggaataaataccagacagagactgtacctcaggaacagatcaaacttctctatggcatggcacatact cgtatagtatggctgcttgttaggtttcttgaatatacaaaaaatgaaagccttgtcagatcacaagatttcttcacagt cgtacaatatattgctcagaatccggcagggaaaagtttaacatgggactgggtgaggtccaattacgattaccttgttc aaaggttcacaactttttctcgatcatttggaagattggtaccgaacattatatcggatttcaatactgcatttcaactg caagaggttgaagaatttttcaaaaaatatcccgatgcaggggccggtgcgaatgcaaggggcatggctttagagggcat aaaacgaaacattaaatggaaacaagatagtgagactcagattgtggactggttatgtaatactgtgaagatttgttaa |
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Protein
| Protein ID | pfu_aug1.0_2703.1_01209.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2703.1_01209.t1 MSSKTKTYVNKRVVYACVFLMLALPVLVGVLVWYFTKNDCDAKLNNNPPSAAAAANTGGKLSTKLPEVTTRKPSADEPWL YPRLTRDVLPSHYDITLYPNFYGDNGVFEGNETVELDVKKDTRFVLIHINFLDISQTSLRFKDTSQSISFKTAWFYEKNQ YWVIECDQTLAKGSVLVLDLTFSGSLTRAIVGFYKSSYINSITKEERHLATSKFEPVNARRAFPCFDEPNIKANYTVHLV HRPGYIALSNMPDTDTVPWEHENSLLITHFERSVEMSTYLVCFTVCDFTYLNDTTKFGTPIRAFATPDRVNQTVFALMVA KNAMELYEEYFNVKYPLPKQDLIAIPDFVSGAMEHWGLISFRETNFLYDEEEASPANQQRVNIVVSHEVSHQWFGNLVTM DWWDDLWLNEGFASFIEYLGANYSEPSWKMVDNPDQINEVFDGITYSKLSMVHFHKLCDIIESDWRRLVEPDSNRSLMRT NMISLACGMADKDCLDNATRKFRDWLDNGISVSPNIRSLVYRYGMQSGGSAEDWDKLWNKYQTETVPQEQIKLLYGMAHT RIVWLLVRFLEYTKNESLVRSQDFFTVVQYIAQNPAGKSLTWDWVRSNYDYLVQRFTTFSRSFGRLVPNIISDFNTAFQL QEVEEFFKKYPDAGAGANARGMALEGIKRNIKWKQDSETQIVDWLCNTVKIC |
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