Gene
| Gene Model ID | pfu_aug1.0_27098.1_33599 |
|---|---|
| Locus | scaffold27098.1 : 1 ... 7704 : - |
| To GenomeBrowser | scaffold27098.1:1..7704 |
| Genes list of scaffold | scaffold27098.1 |
| Synonym | pfu_aug2.0_324.1_13988 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27098.1_33599.t1 | 1 | 1 | CK_II_beta | 6 | 41 | 4.5e-10 | 39.3 | 3.1e-14 | 4.5e-10 | 39.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27098.1_33599.t1 | gi|149028073|gb|EDL83524.1| | casein kinase 2, beta subunit, isoform CRA_c [Rattus norvegicus] | 9.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_27098.1_33599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27098.1_33599.t1 atgatgatttagaggacaatcctaatcaaagtgacctgatagagcaagcagcagaaatgctgtacgggcttatacatgcc cgctatattatgacaaatagaggcattgcccaaatgaaaaatagcgtaattcctgattattttcattga |
|
Protein
| Protein ID | pfu_aug1.0_27098.1_33599.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27098.1_33599.t1 DDLEDNPNQSDLIEQAAEMLYGLIHARYIMTNRGIAQMKNSVIPDYFH |
|