Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2721.1_15900
Locus scaffold2721.1 : 23451 ... 37152 : -
To GenomeBrowser scaffold2721.1:23451..37152
Genes list of scaffold scaffold2721.1
Synonym pfu_aug2.0_19.1_30006

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2721.1_15900.t1 1 1 5_nucleotid 2 78 2.7e-22 78.9 2.0e-26 2.9e-22 78.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2721.1_15900.t1 gi|242010285|ref|XP_002425899.1| Cytosolic purine 5'-nucleotidase, putative [Pediculus humanus corporis] 1.0e-23

Transcript
Transcript IDpfu_aug1.0_2721.1_15900.t1
Definition-
>pfu_aug1.0_2721.1_15900.t1
ggtcagtggacgtgtttgctgaaatgactggctctttcaaaaaggaggtcctatattttggggaccatatatttggtgac
atactaaagtccaaaaagggtcacggctggaagactttccttgttgtaccagaaatgtcccaggaactgatggtctggac
caagaaaaaggacctgtttgagaagttagaagacctggaagctgaaataggagagatgtacagggtcatttcagtcgtcc
tttgcgagtcaggtgatgagatatgccgatctttacgctgcgtctgtgatgaatctcctacattacccgctatcctacgc
cttcagagcgccatctatgttgctcgtctcatgtgccagatgccccatgagtctacagtagatcatatggctgatttacc
tttagaagtcgcccccatgttacgagaggtagatggcagcactgaagatagaaggaaaaaccgaatggcgcggtcagata
gcatcgtacccaatctttacgcacctgtccccaggcagttcacacaagttcaagaagaagatgagaacagcactgagagt
gaacctgaatctcaaaattaa

Protein
Protein IDpfu_aug1.0_2721.1_15900.t1
Definition-
>pfu_aug1.0_2721.1_15900.t1
SVDVFAEMTGSFKKEVLYFGDHIFGDILKSKKGHGWKTFLVVPEMSQELMVWTKKKDLFEKLEDLEAEIGEMYRVISVVL
CESGDEICRSLRCVCDESPTLPAILRLQSAIYVARLMCQMPHESTVDHMADLPLEVAPMLREVDGSTEDRRKNRMARSDS
IVPNLYAPVPRQFTQVQEEDENSTESEPESQN

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495