Gene
| Gene Model ID | pfu_aug1.0_27210.1_55197 |
|---|---|
| Locus | scaffold27210.1 : 292 ... 10215 : - |
| To GenomeBrowser | scaffold27210.1:292..10215 |
| Genes list of scaffold | scaffold27210.1 |
| Synonym | pfu_aug2.0_59.1_30092 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27210.1_55197.t1 | 2 | 1 | RVT_1 | 195 | 217 | 1.8e-10 | 40.5 | 0.39 | 5800.0 | -3.6 |
| pfu_aug1.0_27210.1_55197.t1 | 2 | 2 | RVT_1 | 449 | 622 | 1.8e-10 | 40.5 | 3.7e-14 | 5.5e-10 | 38.9 |
Transcript
| Transcript ID | pfu_aug1.0_27210.1_55197.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27210.1_55197.t1 atggaggcccgctcagcgacaacgcgacgtacagccactgtggtcactacatgcccccctgagactgatgtcaatcccac accgcccaaatcacgagccacgttgcctgcgagctctcctgaggaggcgcccacaaatattcaggataatgatatcattg atgctatgcttttgtctccacccccgcagagtactattactgcggctcatgatgccttgcctgacttggctgatgctact agcaaaggtacatgtacgctaaatgatggtgcatcaaattatgcattcccaattcaaccaaatgctttagtaagcgtcac tgacgcccttgggactcatgttgcttcctcacttaaatcttctattttcaacaatgaatttgttcatttgcataaactca taccaaacaaagctaacgaggaaccccagcaacagcttacgctagtaaatggggagctcgtaataaaacctaaacacaaa gaagttcgcattaattcactagattcttggacaaatgcttttctcatatacatgagtatctacctttcaaaatttcctga ttatgcccaatccttgcttaaatacttacataccgtgcgcacagccgcacaacgctctactaatttaagttggctcgatt acgatgttcaatttagactaaagcggtctcgcaatcatactattcagtggtgctctgtagatgctgagctctggctcctt tatgttaattcaagctccacatccacaacaaataccacaccagctaaagccggcaaatgttttgacttcaattataaggg tctgtgctctaagcccatttgtaattatcaacacttgtgtatgaaatgttcgaagtcccaccccatgatgaactgcaggg ttcaaacttctaaccgccaagatccaaaaacttttcgccaagaatacaaacacacccccaccacccagtacgccagccat cagtacgctggccaccaatacgccggtcaccagtacgccgcccccaagctgcaagtaaaggctacggcaggggtcaatca aacacgaatacaagagctctgggatatggctcctacccctattaatacttcagtactcgaaactatgttacaatattacc ctgacaaacaaatagctcaagaattgattttaggtttcaagaatggtttcagtattcattacacaggcatacggtccccc attatagcaaaaaatatgaaatcggcaacagctcacgctgaacaattggctgtcaaaatttaccaggaagtcgagttagg aagaattagtggcccattcttggaaaaacccatatctaaccttcgctatagccccatttgccttataccaaaaaaacaag ggggttggcgtatgatttgtaacctctccgtaccttttagaaagagcgtcaacgacgatattgacccaaagctttgctca gttcaatattcatcttttgatagcgccatagaaatgtttcaaaaattggggacaagcgcgttgctcggcaaagaagatat cgcaagcgcattcaggcttctcccgatccgtccaggggatttctgtctgttaggtttccagtttcaaggaaattttttta tcgacaaatgcttgccttttggctgttctgtagcttgtgcaacgtttgaaaaattctcgaccgaattgcactggttaata gaacagcacagttccctggactctatagtacactacattgatgatttcctattcgcaggcccagccaagtccgaaaattg taaagaactcatggccacctttgactttatctgtgaccggttagaggttcctatatctcaagataaaaccgaagggcctt ccactaagctaacaatcctgggccttggcattgatacggatactcaaacgatctactccatgttgtcgagctcagcggct gacgtggcacgcaatcggggaaacagttccatcggtgcattcgtccgcaaccagctggatggtgcagtaattcgttaccc cgatataaaaacatccaagggcaaattattctgtgactctgttcacatgtccaatttagacaactccatatttgtcgcgt cgctgcaagccgccttaaataaatttctatcatcttccgaacgcacgtaccctttctaa |
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Protein
| Protein ID | pfu_aug1.0_27210.1_55197.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27210.1_55197.t1 MEARSATTRRTATVVTTCPPETDVNPTPPKSRATLPASSPEEAPTNIQDNDIIDAMLLSPPPQSTITAAHDALPDLADAT SKGTCTLNDGASNYAFPIQPNALVSVTDALGTHVASSLKSSIFNNEFVHLHKLIPNKANEEPQQQLTLVNGELVIKPKHK EVRINSLDSWTNAFLIYMSIYLSKFPDYAQSLLKYLHTVRTAAQRSTNLSWLDYDVQFRLKRSRNHTIQWCSVDAELWLL YVNSSSTSTTNTTPAKAGKCFDFNYKGLCSKPICNYQHLCMKCSKSHPMMNCRVQTSNRQDPKTFRQEYKHTPTTQYASH QYAGHQYAGHQYAAPKLQVKATAGVNQTRIQELWDMAPTPINTSVLETMLQYYPDKQIAQELILGFKNGFSIHYTGIRSP IIAKNMKSATAHAEQLAVKIYQEVELGRISGPFLEKPISNLRYSPICLIPKKQGGWRMICNLSVPFRKSVNDDIDPKLCS VQYSSFDSAIEMFQKLGTSALLGKEDIASAFRLLPIRPGDFCLLGFQFQGNFFIDKCLPFGCSVACATFEKFSTELHWLI EQHSSLDSIVHYIDDFLFAGPAKSENCKELMATFDFICDRLEVPISQDKTEGPSTKLTILGLGIDTDTQTIYSMLSSSAA DVARNRGNSSIGAFVRNQLDGAVIRYPDIKTSKGKLFCDSVHMSNLDNSIFVASLQAALNKFLSSSERTYPF |
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