Gene
| Gene Model ID | pfu_aug1.0_27287.1_40665 |
|---|---|
| Locus | scaffold27287.1 : 1 ... 4115 : - |
| To GenomeBrowser | scaffold27287.1:1..4115 |
| Genes list of scaffold | scaffold27287.1 |
| Synonym | pfu_aug2.0_799.1_31167 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27287.1_40665.t1 | 2 | 1 | GST_N | 3 | 54 | 1.0e-05 | 25.6 | 2.6e-09 | 3.8e-05 | 23.7 |
| pfu_aug1.0_27287.1_40665.t1 | 2 | 2 | GST_N | 64 | 81 | 1.0e-05 | 25.6 | 0.085 | 1300.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27287.1_40665.t1 | gi|307169884|gb|EFN62393.1| | Elongation factor 1-gamma [Camponotus floridanus] | 2.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_27287.1_40665.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27287.1_40665.t1 atggcagctgggactctgtacacgtatccagacaatttcagagcttttaaagccctcattgctgcccagtacagcggtgc cgatgtcaaagttccaagcaacttcaagtttggagcgacaaataaagaggctggtttccttgcaaaattcccgttaggaa agaacttgctcagttataaatattggtataaattgtaccatcatcgtaatcaacttttgcaattccgacaccgaatattg tattatgttgccgttgaccgatactctgtgatatacatgtatccttgtaaacctgaatcaacatcttcaaagcggagcct tgacattcgccgttatgacccagatatcgtcaaagagagttaa |
|
Protein
| Protein ID | pfu_aug1.0_27287.1_40665.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27287.1_40665.t1 MAAGTLYTYPDNFRAFKALIAAQYSGADVKVPSNFKFGATNKEAGFLAKFPLGKNLLSYKYWYKLYHHRNQLLQFRHRIL YYVAVDRYSVIYMYPCKPESTSSKRSLDIRRYDPDIVKES |
|