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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_27305.1_19172
Locus scaffold27305.1 : 365 ... 6775 : -
To GenomeBrowser scaffold27305.1:365..6775
Genes list of scaffold scaffold27305.1
Synonym pfu_aug2.0_27.1_23268

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_27305.1_19172.t1 1 1 Peptidase_C54 4 115 1.6e-32 112.8 1.5e-36 2.2e-32 112.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_27305.1_19172.t1 gi|115954366|ref|XP_001181425.1| 3.0e-27

Transcript
Transcript IDpfu_aug1.0_27305.1_19172.t1
Definition-
>pfu_aug1.0_27305.1_19172.t1
atgccaactatagaaaagttcaagcagcagttttgtagtcttctttggttcacttatcgtcaggactttcctgcgatccc
tggaacaaaactgaccactgactgtggatggggctgcatgcttcgtagcggtcagatgatgttggcaaaggcattcagta
tacactatctgggcagagaattactgtacatttatattccatacatattatgctctactttagactggaatgtcttcagc
aatcagactcgagagcaagacacatatcgtaaacagattattcgatggtttggtgattaccccagcgaagagagtccatt
tggcatgcacaagttggttacgttagaatgggaaagattaataaaatatttgagaattacgtccagtgcttag

Protein
Protein IDpfu_aug1.0_27305.1_19172.t1
Definition-
>pfu_aug1.0_27305.1_19172.t1
MPTIEKFKQQFCSLLWFTYRQDFPAIPGTKLTTDCGWGCMLRSGQMMLAKAFSIHYLGRELLYIYIPYILCSTLDWNVFS
NQTREQDTYRKQIIRWFGDYPSEESPFGMHKLVTLEWERLIKYLRITSSA

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