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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2731.1_59017
Locus scaffold2731.1 : 491 ... 9905 : -
To GenomeBrowser scaffold2731.1:491..9905
Genes list of scaffold scaffold2731.1
Synonym pfu_aug2.0_269.1_30544

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2731.1_59017.t1 1 1 IDO 6 111 2.2e-30 105.4 2.1e-34 3.1e-30 104.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2731.1_59017.t1 gi|297299284|ref|XP_001095833.2| PREDICTED: indoleamine 2,3-dioxygenase 2 [Macaca mulatta] 7.0e-21

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_2731.1_59017.t1
Definition-
>pfu_aug1.0_2731.1_59017.t1
atgataggcgatatacaatcattcctgagaagtatgagacaacacatgccaaccggccaccgacggttcattgaggatat
tcatacaaaatcaaaaattcgaagatatgttttggactctggtgacagggaggttgttttagcgtacaatagttgtattc
aagcagcctcggattttagatcttatcacatccaaatcatcaccaaatacatcatagtcatggccagacagcgagcaaag
gataacgattacgaatctgtggcagaacaaggaactgggggatcaagtttgacaccatttttgaagagtttaagggatgc
aactcttgccagactgattccttctacatag

Protein
Protein IDpfu_aug1.0_2731.1_59017.t1
Definition-
>pfu_aug1.0_2731.1_59017.t1
MIGDIQSFLRSMRQHMPTGHRRFIEDIHTKSKIRRYVLDSGDREVVLAYNSCIQAASDFRSYHIQIITKYIIVMARQRAK
DNDYESVAEQGTGGSSLTPFLKSLRDATLARLIPST

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