Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2731.1_59018
Locus scaffold2731.1 : 19266 ... 35443 : +
To GenomeBrowser scaffold2731.1:19266..35443
Genes list of scaffold scaffold2731.1
Synonym pfu_aug2.0_269.1_30543

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2731.1_59018.t1 gi|328786814|ref|XP_391908.4| PREDICTED: RB1-inducible coiled-coil protein 1 isoform X3 [Apis mellifera] 5.0e-39

Transcript
Transcript IDpfu_aug1.0_2731.1_59018.t1
Definition-
>pfu_aug1.0_2731.1_59018.t1
atgctgacctttgatatgaacctgcttacggagagtgtaagtgctctacaagcagtgattggaagggcgtgtcatatccc
tgtggagaagcaggtcttactgatcagtggtggagaaagtctggatccgtcagctaaagtctgcaaataccatgctggct
atgacacaaaccccatatttctgttcagtaaatcacagattgaagcagccactcccccttcccctagtgtccatctaggc
tcagctgtgtcagacatttctgagaagtcgggaaaatcagacaagtcggataaatctacttcctcctccatgtccggcag
taagaacttgtttgaatggatcagttctcaggatccccagcatagtttacaggacatggtgtcccagtgtgtaaaggcca
cagaacactttgaccagcgtgtccttgacaccctgatgtcggaagtgaccgatacattcaaacaagtggacaaccccagt
atgaaggaagtgaaggggatagaggacaggctttatggactggaccaaatactcagtggagcaaggaaaatcgtacagga
acagagtgatatggctcagggatttgtacagaatcagaatcgggtgaccaaactacgtgataattccatactaccagatc
tgtgttcaagtcataaacgacagttacttgtgatgtcacagaaccataaaaaactccaggacaccaagaaaaaatgtctg
atggcaaaacaggaactgtctatcaacctacatactcgactaaggtctgaaggggctttaagtccaactgaaaaaccgga
atcactaatgcccaaaagtctttcagaagcactgacgaaggaaatgcgagaagctaattctggagtcagtgtgaaaacag
atgttaaagttgagaaacttgagaaggaaagtccgaaggatcctacagataaatctgtagggtcggcatctacgtcctcg
ggagaacagctgaaatctacggagagcgatatgtctgctcaggataaaagcacagaggatagaagtctagacagtattcc
ttcaagtcggaaaaatgtgttacgtcgtgtgactctgggtacgtcaccagatatggagacatcgcaagaattcaccacgg
cagatttttatatcgaggattccatgccctcttccatagcagattctccgatgggaaaacaaacagaaactactcaggaa
actgtgtgtatggtacaagatgaaaaatccactcaagtaaacttgctggaacaagatatcgaatatttcaggaccgaatt
tctgcaggcaaaagaaaagcataaagagatgcttgaacagcttcagtgtaatataccaatactgagaaatagcgtcaaag
attttgagtcagaatttggttgtaaaagaagtgaagtgctagaatggattgatgatgctaagaagagagtttctgaagct
atactgagttatgatttattgcatagtcaacaacatgatgaaacagtgtctaaactgaaatcagattatgaattctcaat
aaaggatttgaaaagtgaagtagaagggctgaaggaagcaaaatctgctcttgaacaggaaaattctgaacttcataaaa
cggttgagaatataacgaaggaacaaacacaggaaagggaaaagtttgcaaatttagagttgaaattgagggacgaggca
aatgaattattgaaaaaactagaatcacacagtgctgatgcaaagcaaagtgaagttaatttcagtgaggagatggaaaa
tatgaggaaacttgttgcagaaaaagagtcagaattagcaaaagagaaatcttcatgggaagaagctaaggctgaaaagg
aaagaagacatgtagaggaggtggaagacttgaagaagcagagtactttagaactggaagtggagttagataaactcagg
gcagaattaagggctcagtttgacgacatggaattagacattagtgaaaaagataaggccttgtctatagctacagacaa
gatgaaacaacttgagagtgacaagataaaaattgaagaaactctcacagaaaggtttcagaatgaaaaagtggaaattt
caaaaattcttgaggctgaatttcaggagaaattagagaagactgtttccgagaaagtagaggctttgtcgaaagaaaat
atggatgctatagaaaagcttaaagaatcacatgagagtcaaatggaacaaaatttggaagaattacgctcaaaattgac
aagtgaaaaggatgctgatgttgaaaatgttgtcagtaaaatgaatcaagaatttgaaaaatcataccaggaattaaaaa
gcagtttgttggaagagaaagaaaaagttgtgaatgaattaaaagtgctacatcagacggaattgtcaaaaatggaggag
acgttacgctcaaggaatgaagtgctggaagcagaaattaaggcattcacagagagggatgttacaaattgtgaaataca
aactgatatactggaatttacacaacaagaagtacaaacggacatattagaatttatccagaaagaaatgcagacagaca
gattgacagtgcatcagactgaagctcaaactaatgttgtggagactggacagagtgagatgcagactgaggcgtggaag
ggattggacagtgacacacagacggacatgtttgacatgacacacggagggacacagacttctacctcggagtatacact
agtcaaaataacgtctgatgagtcagagatggtggatagagaagttcagacatcatctgacgagattcaaaccgaggcca
ttctcactcatcaggagcataaaaatatgatggcgaccctagaagttagactcactgcagagaaggataaggctctgatt
gaacttcgaagaaagcacgagaaggaagtcagtgatatgatatctaaactggagaaagacaaggaaagttctctgtcgtc
agcagagactagtgctcaagcagaaagacaggtggctttcaatgaggccctaagtaaggtgacacaggaaaaagacaaag
tgatagaggagctcaaacagagagaggccatgctgtcacagcaactaactgaaggaaaagaagccttgaagaagctggag
gaagagagaagtaaattagaggatgtcaagaacagagccatatctcatctcgatgataaagacagggaacataatagtgc
ggaagatgtcaatacagaatcaagaattcaagaattagaagggcctcagaacaggttcaaagttcctgttggtaccaaat
tttaccgagtgaaggcgcggccatggaatcgagaggcggccattgctgccaagagagatgtacaagcaccactgccgcag
gcctctgcttactag

Protein
Protein IDpfu_aug1.0_2731.1_59018.t1
Definition-
>pfu_aug1.0_2731.1_59018.t1
MLTFDMNLLTESVSALQAVIGRACHIPVEKQVLLISGGESLDPSAKVCKYHAGYDTNPIFLFSKSQIEAATPPSPSVHLG
SAVSDISEKSGKSDKSDKSTSSSMSGSKNLFEWISSQDPQHSLQDMVSQCVKATEHFDQRVLDTLMSEVTDTFKQVDNPS
MKEVKGIEDRLYGLDQILSGARKIVQEQSDMAQGFVQNQNRVTKLRDNSILPDLCSSHKRQLLVMSQNHKKLQDTKKKCL
MAKQELSINLHTRLRSEGALSPTEKPESLMPKSLSEALTKEMREANSGVSVKTDVKVEKLEKESPKDPTDKSVGSASTSS
GEQLKSTESDMSAQDKSTEDRSLDSIPSSRKNVLRRVTLGTSPDMETSQEFTTADFYIEDSMPSSIADSPMGKQTETTQE
TVCMVQDEKSTQVNLLEQDIEYFRTEFLQAKEKHKEMLEQLQCNIPILRNSVKDFESEFGCKRSEVLEWIDDAKKRVSEA
ILSYDLLHSQQHDETVSKLKSDYEFSIKDLKSEVEGLKEAKSALEQENSELHKTVENITKEQTQEREKFANLELKLRDEA
NELLKKLESHSADAKQSEVNFSEEMENMRKLVAEKESELAKEKSSWEEAKAEKERRHVEEVEDLKKQSTLELEVELDKLR
AELRAQFDDMELDISEKDKALSIATDKMKQLESDKIKIEETLTERFQNEKVEISKILEAEFQEKLEKTVSEKVEALSKEN
MDAIEKLKESHESQMEQNLEELRSKLTSEKDADVENVVSKMNQEFEKSYQELKSSLLEEKEKVVNELKVLHQTELSKMEE
TLRSRNEVLEAEIKAFTERDVTNCEIQTDILEFTQQEVQTDILEFIQKEMQTDRLTVHQTEAQTNVVETGQSEMQTEAWK
GLDSDTQTDMFDMTHGGTQTSTSEYTLVKITSDESEMVDREVQTSSDEIQTEAILTHQEHKNMMATLEVRLTAEKDKALI
ELRRKHEKEVSDMISKLEKDKESSLSSAETSAQAERQVAFNEALSKVTQEKDKVIEELKQREAMLSQQLTEGKEALKKLE
EERSKLEDVKNRAISHLDDKDREHNSAEDVNTESRIQELEGPQNRFKVPVGTKFYRVKARPWNREAAIAAKRDVQAPLPQ
ASAY

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495