Gene
| Gene Model ID | pfu_aug1.0_2739.1_59023 |
|---|---|
| Locus | scaffold2739.1 : 56197 ... 63455 : - |
| To GenomeBrowser | scaffold2739.1:56197..63455 |
| Genes list of scaffold | scaffold2739.1 |
| Synonym | pfu_aug2.0_1618.1_28410 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2739.1_59023.t1 | 1 | 1 | Neur_chan_LBD | 20 | 221 | 2.6e-32 | 111.7 | 4.6e-36 | 3.4e-32 | 111.3 |
| pfu_aug1.0_2739.1_59023.t1 | 1 | 1 | Neur_chan_memb | 229 | 343 | 1.8e-14 | 54.2 | 2.4e-18 | 1.8e-14 | 54.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2739.1_59023.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2739.1_59023.t1 atgggagccgtagcactggtcaaacaaactgattcctgggtgataaacgacacaaatactctccataccgatttgcttag aggctacaataaaaatatcagaggaaattttgaccagtccacatcaaccattctctacgtacgttttttcatcagcagcg taaactctttcgatgtcatgacgggaactctagcaatagtgggatatttcgatatcatctgggtcgatgaacgtatgacg tgggaatcgtctgcttacaacggcaccacccacatcgtgttcaaccaagatgacgtctggacccctgtggtcatactggg taacggcaatggagaggatgggctggagacgttagggaatagttatcttcaagtcaggtacttccctaatggacaatcta attggaatcccggagataaatatgaaacattttgtggtgccaacatcaaggactacccctatgacgctcagtggtgtgag gtccagtttataccttggggatattcagcaaacgagattcaattcagtttaatcgaatcggaatgtaatcagaatttata cagcgccaacggtcagtgggagttacaggaatgctacttagatactctttatgtagccgaatctacacaactcctgcgac tgaatctgcaactcaaaaggcgtgcatctttttactttgtaagcttgatactaccgataggggcgctgggcgtgctgaat ctactagtatttttgcttccacccgagtcaggggaaaggattggctattctataacgctacttttagctatttgtgtgtt tttaacgatagcgtcagacaacctgcctcagtcctcttacccctcgttttcattcctgtgtaccaaacttctgattgata tgatgatcagctcattggtcgtgctttttaccatcattggactacgtttttacttcaaaaatgacgaacataaagtgcca gattgtgtcgctgctgttgcaagctgcatcctttgccgctgctgtagaagcggtcgccgtgagaaaagtgtgtatgagcg agaggtggtcatacagaccaatggaaatccttatttcatggacgggaagttgcctagacttgaagtaaatgagacaaaag gaggaaaggaaacaggatataatgcaccaagaaaacgtatcacatggactgacgtggggatcgccagcgatattgttttc tttgtctttacattgcttgcttttatcatatcacatgtggcatactttatatatgtgaatgttgtagaaattgataaacc aacataa |
|
Protein
| Protein ID | pfu_aug1.0_2739.1_59023.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2739.1_59023.t1 MGAVALVKQTDSWVINDTNTLHTDLLRGYNKNIRGNFDQSTSTILYVRFFISSVNSFDVMTGTLAIVGYFDIIWVDERMT WESSAYNGTTHIVFNQDDVWTPVVILGNGNGEDGLETLGNSYLQVRYFPNGQSNWNPGDKYETFCGANIKDYPYDAQWCE VQFIPWGYSANEIQFSLIESECNQNLYSANGQWELQECYLDTLYVAESTQLLRLNLQLKRRASFYFVSLILPIGALGVLN LLVFLLPPESGERIGYSITLLLAICVFLTIASDNLPQSSYPSFSFLCTKLLIDMMISSLVVLFTIIGLRFYFKNDEHKVP DCVAAVASCILCRCCRSGRREKSVYEREVVIQTNGNPYFMDGKLPRLEVNETKGGKETGYNAPRKRITWTDVGIASDIVF FVFTLLAFIISHVAYFIYVNVVEIDKPT |
|