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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2739.1_59024
Locus scaffold2739.1 : 63509 ... 73725 : -
To GenomeBrowser scaffold2739.1:63509..73725
Genes list of scaffold scaffold2739.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2739.1_59024.t1 1 1 DUF1253 2 61 1.3e-15 56.8 2.8e-19 1.4e-15 56.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2739.1_59024.t1 gi|348577095|ref|XP_003474320.1| 2.0e-15

Transcript
Transcript IDpfu_aug1.0_2739.1_59024.t1
Definition-
>pfu_aug1.0_2739.1_59024.t1
atggctgacagtcgatttgacttctttataaaaaaggttttaccccatcacaaggacccagtaatgtcacagacctgtat
ctacataccatcttactttgattttgtgagattgagaaattactttgccagagaggaaattgactttgtacatatttcag
atcctacatcaacgaaaacttgcatggatgatgcatctgaggatgcttactgctatgcacggtacagaggctacatctaa

Protein
Protein IDpfu_aug1.0_2739.1_59024.t1
Definition-
>pfu_aug1.0_2739.1_59024.t1
MADSRFDFFIKKVLPHHKDPVMSQTCIYIPSYFDFVRLRNYFAREEIDFVHISDPTSTKTCMDDASEDAYCYARYRGYI

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