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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_27545.1_33623
Locus scaffold27545.1 : 1 ... 7604 : -
To GenomeBrowser scaffold27545.1:1..7604
Genes list of scaffold scaffold27545.1
Synonym pfu_aug2.0_345.1_17317

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
trochophore 1
>Adult tissues
Dshape 1
maleGonad 1
mantle 2
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_27545.1_33623.t1
Definition-
>pfu_aug1.0_27545.1_33623.t1
ctcgattaccttttgtggctcttgatcaaaagcaaacccaaataccaggaagcacaccaccaggatcaaagaaacggaaa
ttatctgatggagaatcccccagtgccaaaccaccaaagacacacaaatctgtggtgatagaaaagccaagtattgtgga
aaatgatccggaggtcagctcaagctcagaggcagagaatgttcctctacaaaatctgaaatctagagtcagaaacacac
tggaaagatttgtccgtaagaattcacacgaagaaattacttcaacgaaagacgagatatcttcgacaatcgattgtgtc
gacttaactgatagtaatgatgggataaaggatgaagaaaaaagtagcgataaaactattgaaaaagaagagaaggaaga
aaataaggaaaatgaatgccagaaagaagatgaagtaaatgaaaagcaagaaaaagttttagaagatagaagtaatgaag
atcggggggaggaggaggttggtacatcctctatggaggtggatgacggagaaaaggattccaagtcagatggaaacacg
tcagtgtcagatacggataggaagaggaacatatctgaagtttctacagggtctgtggaggaggagttcaccacacccgc
aaaacaacgactacagacctcactgattactacacctagttcagagacaaagacccctatatcacctgacagtcttgata
acagccagagtgatgccacacccaagtcctctaaaaccaaaactcctagaaggttatctgacgtgcagaaaaaggagaag
gagatcatgcgacagagaataaaagaacaaaaggaaaaagaaagagaggaaaagaaaaaacagaaggaacaggaaaggtt
agcaaaagaggcagaaagagaaaaacaaaagaaagaaagagaagatgccaaagctgagaaagaaaaacagaagaaagagg
ctcagccaagcaagtcctcctctggactatttatgccgtttgaactgaagaaagacatgtttttggccccggagaaaagg
gagcagcttgatgaggatgctaaaagtcagctagactcactgatacagagtcagctcgccagaatgaaaaagtccggaga
gctaatgccatacccttggcgtcgccattgtcgtcgtccgtag

Protein
Protein IDpfu_aug1.0_27545.1_33623.t1
Definition-
>pfu_aug1.0_27545.1_33623.t1
RLPFVALDQKQTQIPGSTPPGSKKRKLSDGESPSAKPPKTHKSVVIEKPSIVENDPEVSSSSEAENVPLQNLKSRVRNTL
ERFVRKNSHEEITSTKDEISSTIDCVDLTDSNDGIKDEEKSSDKTIEKEEKEENKENECQKEDEVNEKQEKVLEDRSNED
RGEEEVGTSSMEVDDGEKDSKSDGNTSVSDTDRKRNISEVSTGSVEEEFTTPAKQRLQTSLITTPSSETKTPISPDSLDN
SQSDATPKSSKTKTPRRLSDVQKKEKEIMRQRIKEQKEKEREEKKKQKEQERLAKEAEREKQKKEREDAKAEKEKQKKEA
QPSKSSSGLFMPFELKKDMFLAPEKREQLDEDAKSQLDSLIQSQLARMKKSGELMPYPWRRHCRRP

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