Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2758.1_15929
Locus scaffold2758.1 : 4486 ... 10917 : +
To GenomeBrowser scaffold2758.1:4486..10917
Genes list of scaffold scaffold2758.1
Synonym pfu_aug2.0_4301.1_05974

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2758.1_15929.t1 1 1 BAF 1 89 0.0 162.8 0.0 0.0 162.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2758.1_15929.t1 gi|348526027|ref|XP_003450522.1| PREDICTED: barrier-to-autointegration factor-like isoformX1 [Oreochromis niloticus] 1.0e-36

Transcript
Transcript IDpfu_aug1.0_2758.1_15929.t1
Definition-
>pfu_aug1.0_2758.1_15929.t1
atgtcatctacatcacagaaacatagaaactttgtagcagagcccatgggggacaaacctgtgactgaactgtcaggaat
tggagaaacactcggaggaagattgtgtgagagtggttttgataaggcatatgtagttcttggacaatttttggttttaa
aaaaagatgaagaattattcagagattggctaaaggaaacaacaggagctaatgccaaacaacaaggtgattgcttcaat
tgcctcaaagaatggtgtgatagtttcttataa

Protein
Protein IDpfu_aug1.0_2758.1_15929.t1
Definition-
>pfu_aug1.0_2758.1_15929.t1
MSSTSQKHRNFVAEPMGDKPVTELSGIGETLGGRLCESGFDKAYVVLGQFLVLKKDEELFRDWLKETTGANAKQQGDCFN
CLKEWCDSFL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495