Gene
| Gene Model ID | pfu_aug1.0_2760.1_23072 |
|---|---|
| Locus | scaffold2760.1 : 10056 ... 25625 : - |
| To GenomeBrowser | scaffold2760.1:10056..25625 |
| Genes list of scaffold | scaffold2760.1 |
| Synonym | pfu_aug2.0_2409.1_32180 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2760.1_23072.t1 | 2 | 1 | Reprolysin_4 | 49 | 222 | 1.8e-14 | 53.7 | 1.6e-17 | 4.7e-14 | 52.4 |
| pfu_aug1.0_2760.1_23072.t1 | 2 | 1 | Reprolysin_5 | 50 | 222 | 8.8e-21 | 74.7 | 3.0e-24 | 8.8e-21 | 74.7 |
| pfu_aug1.0_2760.1_23072.t1 | 1 | 1 | Reprolysin_2 | 73 | 222 | 4.7e-16 | 59.3 | 1.6e-19 | 4.7e-16 | 59.3 |
| pfu_aug1.0_2760.1_23072.t1 | 1 | 1 | Reprolysin_3 | 77 | 222 | 8.3e-16 | 58.6 | 6.7e-19 | 2.0e-15 | 57.4 |
| pfu_aug1.0_2760.1_23072.t1 | 2 | 2 | Reprolysin_5 | 311 | 343 | 8.8e-21 | 74.7 | 0.93 | 2800.0 | -2.0 |
| pfu_aug1.0_2760.1_23072.t1 | 2 | 2 | Reprolysin_4 | 312 | 342 | 1.8e-14 | 53.7 | 0.85 | 2500.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2760.1_23072.t1 | gi|241156130|ref|XP_002407705.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 5 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2760.1_23072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2760.1_23072.t1 atgtccctcttattagtcccctaccggcaacgccgaaggggactcttagtttcctctcgggctgtctgtccgtctaagaa agattataaatatagctataaggcacaagaagatcatgatcgtcggaagcgaagtgttgaccccaccaagaccgtttgtg agctgtacatgcaggcagaccatttgttctatcaaagatatgacagcaatgccgatacaatcatagaacaactcagctca tatgtacaagctgtaaacaacattttccaaccaattgatttcgatgacgactcatcttcagacaatatacgctttattgt gaagaggttgaaaatcttcacggaccccaatgctgcaggatataagtttcccagtcactacagcgtagagaagttcctag acatacactcagaaaccaactataacgatttttgtttgtcgtatatgtttaccgatcgcgacttcgatggaggagttcta gggttggcatgggttgcctccctttcttcatcaggaggagtgtgcgaaactttcaagacctattccggcaacgagcagaa aagtttaaatacagggattgtaactgtaaagaattatggtaaatcggtggcatctgtggtgacgcaggttacatttgcac atgaactgggacataattttggttcagatataagactggttcttgattctctgtctgatctgaaagttgttttgtctgat gtcatttatgtgtcgctttcttatgggtttgtttcgtttggtgagtgcagagcgtatcaactgcgatatgaacacgctac tcagaaaaggaaagtttgtaatgctgaaattgaagtcgtcacgttcgtcatagaagaccaaagattgaatgaattcagct tcgtacgagtaaaggaaaatgtcggcaaggagtggggcacaattggtccccattggaattccgacaagttgctggaagac ctttcctctaaacacaacaaaaatgttgaatgttcggcttctgtgtgtctggccaatggttaccagtcgtgccaatgtca tggcaatggtttctcggatgccaacctctgcaagctttgttgtgtggacggaaacggtacctgcaagtttgcgtcagagc tttcaggaatcacagaaacaaatgctttcccgggctctccatgcaatgacttccaagggtactgtgacgtcttctatgtc tgtagggaggttgatccatcaggtcccttaaacaatatccggaagctgttactgtcgggtgaagtcattgaaactgtcaa gacattcctcacagaacactggtacgtgggtattgctgctggtgtcggacttataattattctagcagtgattgttaaag tttgttcaaaaaagtcatggtcccaaaacacggtcttcgtcgttagaggtattatcaaagaataa |
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Protein
| Protein ID | pfu_aug1.0_2760.1_23072.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2760.1_23072.t1 MSLLLVPYRQRRRGLLVSSRAVCPSKKDYKYSYKAQEDHDRRKRSVDPTKTVCELYMQADHLFYQRYDSNADTIIEQLSS YVQAVNNIFQPIDFDDDSSSDNIRFIVKRLKIFTDPNAAGYKFPSHYSVEKFLDIHSETNYNDFCLSYMFTDRDFDGGVL GLAWVASLSSSGGVCETFKTYSGNEQKSLNTGIVTVKNYGKSVASVVTQVTFAHELGHNFGSDIRLVLDSLSDLKVVLSD VIYVSLSYGFVSFGECRAYQLRYEHATQKRKVCNAEIEVVTFVIEDQRLNEFSFVRVKENVGKEWGTIGPHWNSDKLLED LSSKHNKNVECSASVCLANGYQSCQCHGNGFSDANLCKLCCVDGNGTCKFASELSGITETNAFPGSPCNDFQGYCDVFYV CREVDPSGPLNNIRKLLLSGEVIETVKTFLTEHWYVGIAAGVGLIIILAVIVKVCSKKSWSQNTVFVVRGIIKE |
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