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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2761.1_15935
Locus scaffold2761.1 : 66160 ... 72785 : -
To GenomeBrowser scaffold2761.1:66160..72785
Genes list of scaffold scaffold2761.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2761.1_15935.t1 1 1 Tmemb_185A 19 111 9.2e-25 87.6 2.1e-28 1.0e-24 87.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2761.1_15935.t1 gi|189238033|ref|XP_966902.2| PREDICTED: transmembrane protein 185A [Tribolium castaneum] 1.0e-25

Transcript
Transcript IDpfu_aug1.0_2761.1_15935.t1
Definition-
>pfu_aug1.0_2761.1_15935.t1
atggaagctgaccgttattataggagcttcagttggaagctatatttggtggaaaaaccctcagtatcgttggagctatt
ttgtgccgttaacattctacagtttatatttctggcgttacgtctggataaagttatacagtggagctgggtgattgtct
ttatacccatctggatagtaatgtgtacagctatgattggagtcctctacgctattatactggccattatactcgtaaaa
tcaccgaacatcgtccctcatcagtcacgagggaatgtttccacggcgatcggatattcctgcttggtcgtccctctact
tatatttgaggtttgttag

Protein
Protein IDpfu_aug1.0_2761.1_15935.t1
Definition-
>pfu_aug1.0_2761.1_15935.t1
MEADRYYRSFSWKLYLVEKPSVSLELFCAVNILQFIFLALRLDKVIQWSWVIVFIPIWIVMCTAMIGVLYAIILAIILVK
SPNIVPHQSRGNVSTAIGYSCLVVPLLIFEVC

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