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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_27640.1_04591
Locus scaffold27640.1 : 1 ... 15280 : -
To GenomeBrowser scaffold27640.1:1..15280
Genes list of scaffold scaffold27640.1
Synonym pfu_aug2.0_2209.1_32096

Manual annotation
Study fieldBiomineralization
Gene nameTGF beta receptor1A
DescriptionNCBI blastp hit to ref|XP_001184902.1| [Strongylocentrotus purpuratus]
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_27640.1_04591.t1 gi|261289817|ref|XP_002611770.1| hypothetical protein BRAFLDRAFT_268910 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug1.0_27640.1_04591.t1
Definition-
>pfu_aug1.0_27640.1_04591.t1
gcgtatcccagcgacctccgttacagtggtcagaaaatctggtcagcatcagctatgtacatccttatatcattgccatg
aacgatgaattcatcacaattcacagtattttagatcagcaacagaagcaagcaatactatttcagggcggcacatttat
ggagaattttgatggtcgattgtttgtagcatcaggaagagaaatctactgcttagtacctgttgcatgggaaaaacagg
ttcaagcgttacttcaggataagcgggtcactgaggcattagaattggcaaaaaatgccaataaaacgggcagcaaagac
aagtacctaaagatctataagagattacagcaacaggcagcgtttatagagttttctcagcaacactttgaggaagctga
agatttatttaaagctggccagttggatgttagagaaatatttacggagagacctcagaatgaactaccgtcagagcgac
ttcgaccagaaactgtgatcgattacttacatagattccctaaagctgtgatatcatacctcgagtatctggtttttcag
aaaaagttagaggggaaagatcctctgtaccgtaaacatctcttccacatactcctcagtgtatatctaaatccctcaca
tgagcataaagatcaacttgttagacctgctgtagaactgctcaatagtaacattgctgattttgacacgattaagctat
tgtatttgattcatgcctatatgatcaatgaatccatgtag

Protein
Protein IDpfu_aug1.0_27640.1_04591.t1
Definition-
>pfu_aug1.0_27640.1_04591.t1
VSQRPPLQWSENLVSISYVHPYIIAMNDEFITIHSILDQQQKQAILFQGGTFMENFDGRLFVASGREIYCLVPVAWEKQV
QALLQDKRVTEALELAKNANKTGSKDKYLKIYKRLQQQAAFIEFSQQHFEEAEDLFKAGQLDVREIFTERPQNELPSERL
RPETVIDYLHRFPKAVISYLEYLVFQKKLEGKDPLYRKHLFHILLSVYLNPSHEHKDQLVRPAVELLNSNIADFDTIKLL
YLIHAYMINESM

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