Gene
| Gene Model ID | pfu_aug1.0_27673.1_19192 |
|---|---|
| Locus | scaffold27673.1 : 1 ... 7582 : + |
| To GenomeBrowser | scaffold27673.1:1..7582 |
| Genes list of scaffold | scaffold27673.1 |
| Synonym | pfu_aug2.0_9.1_29942 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27673.1_19192.t1 | 1 | 1 | ERAP1_C | 41 | 225 | 7.7e-38 | 130.5 | 6.00036e-42 | 8.9e-38 | 130.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27673.1_19192.t1 | gi|221039764|dbj|BAH11645.1| | unnamed protein product [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_27673.1_19192.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27673.1_19192.t1 gtactagtagttatgaatggatggttcctgtcactataatgagtaaaagcaaagatgtgaaaaaagtccttcttgaaaaa cccagcatggaggtcacactagacaatgtcaaggcagatgattgggtcaaggttaacagtggaacagtgggagtgtacag agtacagtatacatctgagtccttagaatgttttataccagccattaaagataaaagtttacctgccaccgatagacttg gacttcagagtgacctttttgcattggcgagggcaggtatggtgtcggctgtagatgtcctaaaggtagccgaggcatac attaacgaggacaactatacagtgtggagtgacctgggtatgagcctgggaggagtgggaatcatcctacagaacacaga cagttatgataagtacaaggcattcactaggaaactgtttaagcctgtagctgactctgtgggatgggaccccaaggctg atgaaggtcccttggtagccatgttaagagacctcgccctaggtaagcttggtcgtagtaatgatgaagccaccgtagcc gaagccaggaagagatttgatgctcacgttgctgggacaaccacactgtctgctgatcttaaaagtccagtatatagtat agtgatgtcaaatggagatcaggaagcatatgataagatgatgaag |
|
Protein
| Protein ID | pfu_aug1.0_27673.1_19192.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27673.1_19192.t1 TSSYEWMVPVTIMSKSKDVKKVLLEKPSMEVTLDNVKADDWVKVNSGTVGVYRVQYTSESLECFIPAIKDKSLPATDRLG LQSDLFALARAGMVSAVDVLKVAEAYINEDNYTVWSDLGMSLGGVGIILQNTDSYDKYKAFTRKLFKPVADSVGWDPKAD EGPLVAMLRDLALGKLGRSNDEATVAEARKRFDAHVAGTTTLSADLKSPVYSIVMSNGDQEAYDKMMK |
|