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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_277.1_07457
Locus scaffold277.1 : 6296 ... 14112 : +
To GenomeBrowser scaffold277.1:6296..14112
Genes list of scaffold scaffold277.1
Synonym pfu_aug2.0_2058.1_28643

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_277.1_07457.t1 2 1 p450 7 53 0.0 177.7 5.0e-10 7.4e-06 24.7
pfu_aug1.0_277.1_07457.t1 2 2 p450 61 208 0.0 177.7 0.0 2.8026e-44 151.4

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
adductorMuscle 1
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_277.1_07457.t1
Definition-
>pfu_aug1.0_277.1_07457.t1
atggcagatttgttaacagaatttaagaagctccgtcaacagtacggggatgtgtacagtttaatactaggttcacagac
cgttattgtggtcaatggactggacacactgaaggagctattcatcaaacatggagatgtagtcagcaatagatctgata
gtattataatatcaaaaatatccgaatataaagacgatcaactacatagatctatatctgatctttttgttgcggggacg
gagaccacatccacagcactaagatggttcactctaacagttttacataaaccagagatccaagagcgcatgcgcgctga
aattcgaaaagaaataggcgaatcaaagctaccgtctatggctgaccgtcctaagctaccatattgtgattcggtgatcc
atgaagttctccggtttggaaatattgctcctttgtccgttccgcatggtttaacagaagatttacaattccgtggattt
cttattcctaaacatgcgatgttaatgccaaatttagattcagtgttgaatgatcctgaaatatttgaaaatccatcaga
gtttataccgacccgatttctatctacagatggcaccttgactggaacggaaaaggttcacacattcggaatagattgtc
aatatgaaatgacggacacagacatcgaagtaaggtttcggatttttggagtcggtcgtggttcgcgtaattttgagttg
atgaaagtattaggtttcggacgttctgagaatttcggttttactcagccgctgagtaagggtctagatcagggtcccgt
catatgtcattttcgtgtatctcaaaccttcgtgtacaaaacgtatatagtgaattatctgggtgaatgttgtgagagac
gtaggatgcaattgaacacagttgggtgctccatagacttcaatggaaaaggcatttag

Protein
Protein IDpfu_aug1.0_277.1_07457.t1
Definition-
>pfu_aug1.0_277.1_07457.t1
MADLLTEFKKLRQQYGDVYSLILGSQTVIVVNGLDTLKELFIKHGDVVSNRSDSIIISKISEYKDDQLHRSISDLFVAGT
ETTSTALRWFTLTVLHKPEIQERMRAEIRKEIGESKLPSMADRPKLPYCDSVIHEVLRFGNIAPLSVPHGLTEDLQFRGF
LIPKHAMLMPNLDSVLNDPEIFENPSEFIPTRFLSTDGTLTGTEKVHTFGIDCQYEMTDTDIEVRFRIFGVGRGSRNFEL
MKVLGFGRSENFGFTQPLSKGLDQGPVICHFRVSQTFVYKTYIVNYLGECCERRRMQLNTVGCSIDFNGKGI

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