Gene
| Gene Model ID | pfu_aug1.0_2770.1_01223 |
|---|---|
| Locus | scaffold2770.1 : 6584 ... 23015 : - |
| To GenomeBrowser | scaffold2770.1:6584..23015 |
| Genes list of scaffold | scaffold2770.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2770.1_01223.t1 | 2 | 1 | Tubulin | 4 | 71 | 5.9e-17 | 62.2 | 1.5e-20 | 1.1e-16 | 61.3 |
| pfu_aug1.0_2770.1_01223.t1 | 2 | 1 | Tubulin_C | 77 | 136 | 1.6e-21 | 76.6 | 5.3e-25 | 3.9e-21 | 75.3 |
| pfu_aug1.0_2770.1_01223.t1 | 2 | 2 | Tubulin | 170 | 176 | 5.9e-17 | 62.2 | 0.34 | 2500.0 | -2.0 |
| pfu_aug1.0_2770.1_01223.t1 | 2 | 2 | Tubulin_C | 172 | 194 | 1.6e-21 | 76.6 | 0.75 | 5600.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2770.1_01223.t1 | gi|351715449|gb|EHB18368.1| | Tubulin gamma-2 chain [Heterocephalus glaber] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2770.1_01223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2770.1_01223.t1 atgatgccgtcgaggtttccaaagaagttagtacagacatactcagtgttccctaacttggacgagatgtcagatgtcgt ggtgcagccttacaactcgttactaactctgaaaagacttacacaaaatgccgactgtgtggttgtattggataacacag ctttgaataggatagctgctgacagacttcacatagaaactccaaacttctcacaaatcaaccaactggtacacaaaagt ttacagcggatcagggagcgtaagctggcccagttcattccctggggaccggccagtatccaagtagctttatcacggaa gtctccctacatacagacatctcatagagtaagcgggctcatgctggccaaccatacgagtatatctagtttgtttgagc gcaccctcagacagtacgacaagttaaggaagagagaagctttcatggatcagtttaagaaagaagcaatgtttaaggac aatttagatgagtttgataattctcgagaagtaattcagcaacttgtagatgagtatcaggcggcgacaaaacctgacta tctatcatggggaacacaacagctcacctcgacaaaattgagtgagctttatgcaaaacccctgctcgtccgcgtctgtg tccagttaagaagttttggttag |
|
Protein
| Protein ID | pfu_aug1.0_2770.1_01223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2770.1_01223.t1 MMPSRFPKKLVQTYSVFPNLDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAADRLHIETPNFSQINQLVHKS LQRIRERKLAQFIPWGPASIQVALSRKSPYIQTSHRVSGLMLANHTSISSLFERTLRQYDKLRKREAFMDQFKKEAMFKD NLDEFDNSREVIQQLVDEYQAATKPDYLSWGTQQLTSTKLSELYAKPLLVRVCVQLRSFG |
|