Gene
| Gene Model ID | pfu_aug1.0_27785.1_33642 |
|---|---|
| Locus | scaffold27785.1 : 906 ... 6676 : + |
| To GenomeBrowser | scaffold27785.1:906..6676 |
| Genes list of scaffold | scaffold27785.1 |
| Synonym | pfu_aug2.0_1313.1_11585 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27785.1_33642.t1 | 2 | 1 | zf-B_box | 62 | 105 | 2.5e-14 | 52.8 | 1.1e-08 | 5.6e-05 | 22.9 |
| pfu_aug1.0_27785.1_33642.t1 | 2 | 2 | zf-B_box | 119 | 154 | 2.5e-14 | 52.8 | 2.3e-12 | 1.1e-08 | 34.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_27785.1_33642.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27785.1_33642.t1 atgaatgctcgtttgatatcacgtggtttcaagtgtgatagcaacttccttgaatactcaagttttacactgttgtgtag tcaaacgaggaagaaattcaatatacatgtatatattaaattttgcaaatacaaaatggcgtttgcttcaacaatgatag gggcacaggaggccatcataaaatcgtgtgatatttgcgaagaaggtgaaaacgtcaattggtattgtgtcgactgcgcc cagaatctatgtgacggatgtgaaaaaggacataagaaaatcgctacatgtaaaaatcaccagattgtctccatttcgga gggtatttccattacaaagaggaacgtctcaagtctatgcaaggaacatagtgaaggattttcattcttctgccgatcat gtgagaaaaacatttgctcaaagtgtctctctgctagccataagtcacataatttcgtagaacttcgggattatcaatca gaattacaggatagactggaagccattttgaaggaaaaggaaggagaaaaggaacttataacacaaagcataaatgcttc tatcggacatgagaaaaaatgtgaagaaacattaactcaaaactacaccgccattgacgacatggtgagatcaatccaaa tagccgccaccgaggaggggtcaaagatgaaactctctctaaaatcaggcatcgatgggagactgacagaggcaaaagaa aacagacaaaaaatgcaagcacaaaagaacctttacgacaaagagatccaagctgttcaacaagagttaagaatacagac tcctccaacgtttaaccagtttttcaaagcgtcaacctacaagctacaatccctcaaacctttggtattcccgttgccag taatcaacacgtttaccgcaggacatatgcaaaaagagcttatccgggatatgatcggtaaagatggagaagaagtccat gcagaagcaccacctcaggaaatgctaacaaggagcttccgggccattaatcaaaatctggaaacagtcaacactttcaa caaactggattctgcaaagaattgttatagtatatgcatcagctctgaaggttatatttggcttggcgggaagggatgcg tctacaagatgagctcagactgctccaagacgaatcatcagataccagcccgggaatcccgactatcctgtgattacata acatgtttacagtcaggggatgctgtggtgtcatatggatatgggtcacacttcctggacagattcaccactgatgggaa gagagtagaattcacagacttatctccacgtcatggctacgatatagccaaaacatacgatgacgaagtggtggttagtg catgtactgactaccttggtttgctctcagatctgaattcatggtccttaatcatatgctcaaaggaagggaaaaagctg aaggacatcaaaatgggagaaaatatcggaaactttggcatcgatgtatatggtaacattatcaaatctgctgaagcttc gctttcgttaacaattctagacagaaggggaaccgttctgaagactgtcccaacaaagaaaccaaatctacagagaatct catgtgacagtcatggaaacattgtaggtgtctcaggaggagggaaagaggtccgtgtaatcagtgatgatggaaaagaa gaaagatgctttactgtaaagtgtcggaatggtatcaatgacatctgtattgacagtgaaaatcgtctgctaatactaat ggacaaaaagagagtcgtcgtcggaaaatacctgtaa |
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Protein
| Protein ID | pfu_aug1.0_27785.1_33642.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27785.1_33642.t1 MNARLISRGFKCDSNFLEYSSFTLLCSQTRKKFNIHVYIKFCKYKMAFASTMIGAQEAIIKSCDICEEGENVNWYCVDCA QNLCDGCEKGHKKIATCKNHQIVSISEGISITKRNVSSLCKEHSEGFSFFCRSCEKNICSKCLSASHKSHNFVELRDYQS ELQDRLEAILKEKEGEKELITQSINASIGHEKKCEETLTQNYTAIDDMVRSIQIAATEEGSKMKLSLKSGIDGRLTEAKE NRQKMQAQKNLYDKEIQAVQQELRIQTPPTFNQFFKASTYKLQSLKPLVFPLPVINTFTAGHMQKELIRDMIGKDGEEVH AEAPPQEMLTRSFRAINQNLETVNTFNKLDSAKNCYSICISSEGYIWLGGKGCVYKMSSDCSKTNHQIPARESRLSCDYI TCLQSGDAVVSYGYGSHFLDRFTTDGKRVEFTDLSPRHGYDIAKTYDDEVVVSACTDYLGLLSDLNSWSLIICSKEGKKL KDIKMGENIGNFGIDVYGNIIKSAEASLSLTILDRRGTVLKTVPTKKPNLQRISCDSHGNIVGVSGGGKEVRVISDDGKE ERCFTVKCRNGINDICIDSENRLLILMDKKRVVVGKYL |
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