Gene
| Gene Model ID | pfu_aug1.0_27788.1_19200 |
|---|---|
| Locus | scaffold27788.1 : 9 ... 1947 : + |
| To GenomeBrowser | scaffold27788.1:9..1947 |
| Genes list of scaffold | scaffold27788.1 |
| Synonym | pfu_aug2.0_1088.1_28037 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27788.1_19200.t1 | gi|260829114|ref|XP_002609507.1| | hypothetical protein BRAFLDRAFT_95600 [Branchiostoma floridae] | 1.99965e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_27788.1_19200.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27788.1_19200.t1 atgccggctccgtatcaacaaaattcactgacaagtgacgaaagtcagtattgtacaacggaggatattctgaatatgaa atctaagaattatgccaaggaaggtgttcaaatacttaatgaaaaatacgattctttaggaaaatttggcccgaaaggaa gtcaagactccgaggccaaagagcgacttgtgatatcgggtccgagtgaagtttcgccaaaacggaagacacctgcagta accgtctgcaactacacagaaggaatttccgagcaggatattctgcaggtagatatgttctacagaagtcataaaacgga cgtttacgtgtgcaaatgtttagccaatctatactttggtaagttgatgggggatcgcgaccagtggaagttcgcgatga cgggaattcctctaattgttctggataccggtgagcatcacagacagaggaagttatttatcgtcttagcagagaaaggg actggatttactttgtggaaggatcatttcgatcagctgtcgtcttacaaagcacctcatccaaattttcatactttgac tctttctacagatcatacaagattggcaggtttcagcttcgatgactcaacgtctgctacagaattttaccagacgatcg aaaaactcatctcaaacccagatgacgaattgctgactctaagcaaatctaagaaaaataaaaagaagaaagagaaaagc aaatcaaaatataaagcgccgaagaaaacggaaatctctactccatgttgttttgttcacgtgaccaagctcgagcggcc cgcacttgacttacaagccgatcaaagcttgatttcagattctttaaatttaccatcacctcaaggtacaagcacaggat cggagcaagatgcatccgaagtgtctagtctcttgggtagcaaattaacaatagatagtgaaacaagttccatcatttct gaggagaggaactctcattcgtga |
|
Protein
| Protein ID | pfu_aug1.0_27788.1_19200.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27788.1_19200.t1 MPAPYQQNSLTSDESQYCTTEDILNMKSKNYAKEGVQILNEKYDSLGKFGPKGSQDSEAKERLVISGPSEVSPKRKTPAV TVCNYTEGISEQDILQVDMFYRSHKTDVYVCKCLANLYFGKLMGDRDQWKFAMTGIPLIVLDTGEHHRQRKLFIVLAEKG TGFTLWKDHFDQLSSYKAPHPNFHTLTLSTDHTRLAGFSFDDSTSATEFYQTIEKLISNPDDELLTLSKSKKNKKKKEKS KSKYKAPKKTEISTPCCFVHVTKLERPALDLQADQSLISDSLNLPSPQGTSTGSEQDASEVSSLLGSKLTIDSETSSIIS EERNSHS |
|