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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2779.1_23081
Locus scaffold2779.1 : 7355 ... 20945 : -
To GenomeBrowser scaffold2779.1:7355..20945
Genes list of scaffold scaffold2779.1
Synonym pfu_aug2.0_1790.1_01836

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2779.1_23081.t1 1 1 IP_trans 23 256 0.0 374.7 0.0 0.0 374.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2779.1_23081.t1 gi|195352456|ref|XP_002042728.1| GM17640 [Drosophila sechellia] 0.0

Transcript
Transcript IDpfu_aug1.0_2779.1_23081.t1
Definition-
>pfu_aug1.0_2779.1_23081.t1
atgtcagcgctggctaagagactggtaggtggtatggctgtgagagaggagggtggggtgtacaggaagaaaaagagtcg
agaagaaactcgtggggaaggcagtggcgtagaaatcattgaaaataagccgtacaaagatggaccaggaggggaagggc
aatacacatacaaaatatatcatataggcagtcatttgccaagttggttccgagccatattgccgaagtctgcgttacgt
gttgaggaggaagcttggaatgcttacccatacacaaaaacacggtaccgatgtccgtttatagagaaatttctgttgga
gatcgagacaaagtaccttaatgatggaggagagcaggataatttatttaacctatcacctcaggagttacgaaataggc
agattgattatctggacattgtgaaggatcctatctctagtggagactacaagaaggaagaggacccgaaaatatatcgc
tcatcaaagacggggcggggtccactgggagaaaattggcgggaagaatactcacgagatgctaagattcctgggaaaaa
tcgttccataatgacagcttacaagttatgcaaagtggaattcaaatactggggaatgcagaataagatagaaaaattca
tccatgaaattggtcttagaaagacaatgctccgagctcacagacaagcatgggcctggcaggacgaatggtatgaattg
aaaatcagtgatattcgacgtttggagcgagagacccagttagcgctagcgaagaaaatggcagatgttgaagggagtga
agtcaaaaatcatattcttgataacnataagtga

Protein
Protein IDpfu_aug1.0_2779.1_23081.t1
Definition-
>pfu_aug1.0_2779.1_23081.t1
MSALAKRLVGGMAVREEGGVYRKKKSREETRGEGSGVEIIENKPYKDGPGGEGQYTYKIYHIGSHLPSWFRAILPKSALR
VEEEAWNAYPYTKTRYRCPFIEKFLLEIETKYLNDGGEQDNLFNLSPQELRNRQIDYLDIVKDPISSGDYKKEEDPKIYR
SSKTGRGPLGENWREEYSRDAKIPGKNRSIMTAYKLCKVEFKYWGMQNKIEKFIHEIGLRKTMLRAHRQAWAWQDEWYEL
KISDIRRLERETQLALAKKMADVEGSEVKNHILDNXK

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