Gene
| Gene Model ID | pfu_aug1.0_27822.1_47859 |
|---|---|
| Locus | scaffold27822.1 : 1 ... 7556 : - |
| To GenomeBrowser | scaffold27822.1:1..7556 |
| Genes list of scaffold | scaffold27822.1 |
| Synonym | pfu_aug2.0_1046.1_21373 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27822.1_47859.t1 | 1 | 1 | TFIIS_C | 35 | 73 | 3.1e-19 | 68.2 | 1.9e-22 | 3.1e-19 | 68.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_27822.1_47859.t1 | gi|47220832|emb|CAG00039.1| | unnamed protein product [Tetraodon nigroviridis] | 5.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_27822.1_47859.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27822.1_47859.t1 gaaatggcgagtgatgccttgaaagaattgcgtgccaagttaacgaaagaagctattaatgaccatcagatggccaaaaa tgaaggaacgacaacagatctctttaaatgtgggaagtgtggaaagcataattgtacctacaatcagctacaaacaagaa gttctgatgaacctatgacgacgtttgttttctgtaatgaatgtggaaatagatggaagttttgttaa |
|
Protein
| Protein ID | pfu_aug1.0_27822.1_47859.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27822.1_47859.t1 EMASDALKELRAKLTKEAINDHQMAKNEGTTTDLFKCGKCGKHNCTYNQLQTRSSDEPMTTFVFCNECGNRWKFC |
|