Gene
| Gene Model ID | pfu_aug1.0_27837.1_33648 |
|---|---|
| Locus | scaffold27837.1 : 6426 ... 7554 : + |
| To GenomeBrowser | scaffold27837.1:6426..7554 |
| Genes list of scaffold | scaffold27837.1 |
| Synonym | pfu_aug2.0_132.1_07017 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_27837.1_33648.t1 | 2 | 1 | BLOC1_2 | 63 | 131 | 1.5e-06 | 28.2 | 3.9e-09 | 1.5e-06 | 28.2 |
| pfu_aug1.0_27837.1_33648.t1 | 1 | 1 | Reo_sigmaC | 99 | 214 | 8.1e-07 | 28.5 | 2.1e-09 | 8.1e-07 | 28.5 |
| pfu_aug1.0_27837.1_33648.t1 | 2 | 2 | BLOC1_2 | 140 | 193 | 1.5e-06 | 28.2 | 0.22 | 85.0 | 3.3 |
Transcript
| Transcript ID | pfu_aug1.0_27837.1_33648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27837.1_33648.t1 atgcatagtgaaacctctgagaaggcagaaacatctacagagagtattacagatacctcgtcgacttcgaaatcgtcatc gtcgtcacttatgagttctatactaggggccgcacatagtgttttttatggtgcaccgcccagtacaccgacatcgacca cacccattctatcgacatcaacgcctaatcaagccagcagccctaaaaacaattcgagcatggatgagatacaaggaatt aagcaggaattccatgatacaaatctaaaacttgacgagattctaacgaggctgaataagctagatgtaatagaagacaa aatctctcagttggagggttcggtgaataacccgaacaaacgggtatcggacatcgaaagcaagtccactgatcttgaga aatccgttcagttccttcataatacattagatgagaatcgcgagaaactgaacgatttaaaagacatacaatccctgaaa tccgtgaagacagatattactagacatgataggagcatggcatcaatgcataaggctttggaggacctaaggaaaaggaa tcgggagctggaggaagatataacggatctcagatgccgatcgatgaaaaataaccttatcttcaccggtttgcaggaaa atagacaggaaaatgtcgttgaacacctcaggtattttttggatcgacagcttggcattacgagatccatttccttcgga aatgttcatagatttggcagagcagagaggggcaggccgagaccgatagtggcgcgatttctattccaagacgaccgaga gcttgtattgagtagcgcaaggatgcttcgtgacacaaatttcgggattcgagagcaattccccagggaaatagaagaaa agcggaggcaactttatccaatcgcacgtgaccttcggcgcggcggcgcacgtacaaaaatggtccgggacaagttgtac gttgatggtaaactttatgaccccgacgataacgaagactggtacgatcctaatgatgtgagtaaccacagagaacaaat ggatactgacactgtaccaaaatctctcaataagtccaacg |
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Protein
| Protein ID | pfu_aug1.0_27837.1_33648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_27837.1_33648.t1 MHSETSEKAETSTESITDTSSTSKSSSSSLMSSILGAAHSVFYGAPPSTPTSTTPILSTSTPNQASSPKNNSSMDEIQGI KQEFHDTNLKLDEILTRLNKLDVIEDKISQLEGSVNNPNKRVSDIESKSTDLEKSVQFLHNTLDENREKLNDLKDIQSLK SVKTDITRHDRSMASMHKALEDLRKRNRELEEDITDLRCRSMKNNLIFTGLQENRQENVVEHLRYFLDRQLGITRSISFG NVHRFGRAERGRPRPIVARFLFQDDRELVLSSARMLRDTNFGIREQFPREIEEKRRQLYPIARDLRRGGARTKMVRDKLY VDGKLYDPDDNEDWYDPNDVSNHREQMDTDTVPKSLNKSN |
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