Gene
| Gene Model ID | pfu_aug1.0_2784.1_51794 |
|---|---|
| Locus | scaffold2784.1 : 7395 ... 79235 : - |
| To GenomeBrowser | scaffold2784.1:7395..79235 |
| Genes list of scaffold | scaffold2784.1 |
| Synonym | pfu_aug2.0_814.1_14576 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2784.1_51794.t1 | 1 | 1 | Helicase_C | 549 | 644 | 1.4e-11 | 44.0 | 1.3e-14 | 4.9e-11 | 42.3 |
| pfu_aug1.0_2784.1_51794.t1 | 1 | 1 | SUV3_C | 798 | 821 | 6.6e-09 | 35.0 | 6.1e-12 | 2.3e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2784.1_51794.t1 | gi|157116275|ref|XP_001658414.1| | AAEL007512-PA [Aedes aegypti] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2784.1_51794.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2784.1_51794.t1 atgttacacgaaatctacgaatatacgaaggacctcacatttgccgatacacgttccccagaatacagactacaaggagt aatcttggacatttctacttttcgtttatttcaagcagttagatcagataaatcagaggagaaaacaaaccgtcctttca ttaaagaagctgaattcattcaatctttggtctctgactggaaaagatacttagcttctgacttcaacttcacttacaga tacatagacgatgtgttgtccatcaataatccaaaattagcggattacctgagcagtatctatccttcagagcttgaagt caaagaaactacagagacaaataattcagcgtcctatttggacataatgttgtcccacgacactgatggtcacatgaaca cctcactctatgacaaagaccaaagtttgaatgaattcagcttcgtacgagtaaaggaaaatgtcggcagggagtggagc acaattggtccccattggaattccgacaatttgctggaagacctttcctccaaacaccacaaaaatgttgtctatcaaaa agtttttactgaatactatctgtttcagtgtacttattttcagaatcggacttttcttttacaaaactctacgaaaaaaa aggctaaaactgatatacagaaaatcatcactgatatagttgatgcaagggagtaccagaagcctgttggtcaagacgga atgggcgaagagattactggcagtaaattaaagctttttgatgtgatgaatgcattgaattacttcaaacataaagatac tgttcgaatggttcttaaggagaatggaatcaaagaggaggccttgtttaatagaatattgatgagtttccgtcattata ttcgcaataatataagaggactgccaccggatcttcatgtattactaagtgatctaacaatccaccaaaaaggtagtgta gatggtttggtgccatattttctaaatcatgccttagaaatatttcctcatctggagtttatggacgatctgaaaaacac atctgacctatcaaagccagctaattggtacatggctgccagagaattgaatcgcaaaataatctttcatgcagggccta caaacagtgggaaaacttatcatgccttacaaaggttcaaggaggctgaacgggcgttatactgtggtcctttacgtatg ttagcccaggaggtctataagagaaccaatgaggagggtatagaatgtgacctacttactggagaggagaggctttttgt ggacccagatgaaaatccagccaatcatttgtcctgtactgtagagactgcaagtgtatatgctcattatgatgtagctg taatagatgagatacagatgatacgtgattctcaacggggctcggcatggacaagggttttacttgggctatgtgccaat gagatccatgtatgtggagaggcttcagctatccccattgtaaggaatataacagaaaccactggtgatgaattcgagat taaagagtatggaagacttacaaaattggagatgtctgaaaaacctgttgaatcatttacaaatatacagccaggtgatt gtatagtaacattcagcaaaaaagacatttatgcagtatgtcaggagctagagaaaataggaaaggatgctgctgtaata tatggtggtcttcctccagcaaccaagcgagctcaggcagaaatttttaacgatccagaccattcctgtaaaatcctcgt ggccacagatgctattggaatgggattaaatctgaacataaaaaggatagtattttattcagtaaagaagatagatatag ctcatcaagaggatggttcctgtcttcgcaaattggcaaatataagcacttctcaagctctacagatagcgggtagggca ggcagatttggcactgaatatgaagatggtgaatacacaacattccatgctaatgattaccacaaactccaggaaatctt gaggaaacaagtcgagccattattacttgcaggtttaaaacccagtgcagatcaggtggaaactttctcttactttatgg gaaattcatcaatgaaacaagttttggaagtcttttacaacattactactgtagatgacacaaactacttcctttgtgaa atgtccaattttaaggcactaagtagtgtaattgaagacgttgagatgactctacgtatgaagtatttcttttgttctgc cccagtcagtattaaggatggagcattcatctcttcaatttttttgatgtattcacgacgttgcagtaagggaattccta caacatttgactttgtttgtcaaagaactggccatccttataaatacccagagtcccttgatgaacaaatggtattagaa caaacttatgatgcactggacctctatctttggttaagctatcgttttgtggacatgttccccagacagattggaggtga aacttctgagagatga |
|
Protein
| Protein ID | pfu_aug1.0_2784.1_51794.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2784.1_51794.t1 MLHEIYEYTKDLTFADTRSPEYRLQGVILDISTFRLFQAVRSDKSEEKTNRPFIKEAEFIQSLVSDWKRYLASDFNFTYR YIDDVLSINNPKLADYLSSIYPSELEVKETTETNNSASYLDIMLSHDTDGHMNTSLYDKDQSLNEFSFVRVKENVGREWS TIGPHWNSDNLLEDLSSKHHKNVVYQKVFTEYYLFQCTYFQNRTFLLQNSTKKKAKTDIQKIITDIVDAREYQKPVGQDG MGEEITGSKLKLFDVMNALNYFKHKDTVRMVLKENGIKEEALFNRILMSFRHYIRNNIRGLPPDLHVLLSDLTIHQKGSV DGLVPYFLNHALEIFPHLEFMDDLKNTSDLSKPANWYMAARELNRKIIFHAGPTNSGKTYHALQRFKEAERALYCGPLRM LAQEVYKRTNEEGIECDLLTGEERLFVDPDENPANHLSCTVETASVYAHYDVAVIDEIQMIRDSQRGSAWTRVLLGLCAN EIHVCGEASAIPIVRNITETTGDEFEIKEYGRLTKLEMSEKPVESFTNIQPGDCIVTFSKKDIYAVCQELEKIGKDAAVI YGGLPPATKRAQAEIFNDPDHSCKILVATDAIGMGLNLNIKRIVFYSVKKIDIAHQEDGSCLRKLANISTSQALQIAGRA GRFGTEYEDGEYTTFHANDYHKLQEILRKQVEPLLLAGLKPSADQVETFSYFMGNSSMKQVLEVFYNITTVDDTNYFLCE MSNFKALSSVIEDVEMTLRMKYFFCSAPVSIKDGAFISSIFLMYSRRCSKGIPTTFDFVCQRTGHPYKYPESLDEQMVLE QTYDALDLYLWLSYRFVDMFPRQIGGETSER |
|