Gene
| Gene Model ID | pfu_aug1.0_2784.1_51797 |
|---|---|
| Locus | scaffold2784.1 : 96476 ... 110671 : + |
| To GenomeBrowser | scaffold2784.1:96476..110671 |
| Genes list of scaffold | scaffold2784.1 |
| Synonym | pfu_aug2.0_814.1_14578 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2784.1_51797.t1 | 10 | 1 | GCC2_GCC3 | 3 | 28 | 6.6e-35 | 118.4 | 1.8e-06 | 0.0053 | 16.3 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 1 | TNFR_c6 | 4 | 9 | 9.0e-10 | 38.4 | 0.27 | 810.0 | 0.2 |
| pfu_aug1.0_2784.1_51797.t1 | 6 | 1 | NCD3G | 6 | 45 | 8.3e-19 | 67.0 | 1.3e-05 | 0.04 | 13.6 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 2 | TNFR_c6 | 7 | 29 | 9.0e-10 | 38.4 | 0.0017 | 5.1 | 7.2 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 2 | GCC2_GCC3 | 17 | 45 | 6.6e-35 | 118.4 | 3.4e-08 | 0.0001 | 21.8 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 3 | TNFR_c6 | 24 | 43 | 9.0e-10 | 38.4 | 0.0002 | 0.59 | 10.2 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 3 | GCC2_GCC3 | 27 | 64 | 6.6e-35 | 118.4 | 2.2e-09 | 6.4e-06 | 25.6 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 4 | TNFR_c6 | 41 | 64 | 9.0e-10 | 38.4 | 2.6e-06 | 0.0076 | 16.2 |
| pfu_aug1.0_2784.1_51797.t1 | 6 | 2 | NCD3G | 41 | 78 | 8.3e-19 | 67.0 | 1.5e-06 | 0.0046 | 16.6 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 4 | GCC2_GCC3 | 53 | 80 | 6.6e-35 | 118.4 | 3.8e-09 | 1.1e-05 | 24.8 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 5 | TNFR_c6 | 58 | 80 | 9.0e-10 | 38.4 | 1.9e-05 | 0.057 | 13.4 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 5 | GCC2_GCC3 | 61 | 93 | 6.6e-35 | 118.4 | 6.1e-08 | 0.00018 | 21.0 |
| pfu_aug1.0_2784.1_51797.t1 | 6 | 3 | NCD3G | 73 | 113 | 8.3e-19 | 67.0 | 5.7e-08 | 0.00017 | 21.2 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 6 | GCC2_GCC3 | 78 | 126 | 6.6e-35 | 118.4 | 6.6e-11 | 1.9e-07 | 30.5 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 6 | TNFR_c6 | 92 | 114 | 9.0e-10 | 38.4 | 0.00015 | 0.43 | 10.6 |
| pfu_aug1.0_2784.1_51797.t1 | 6 | 4 | NCD3G | 108 | 147 | 8.3e-19 | 67.0 | 1.9e-08 | 5.6e-05 | 22.7 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 7 | GCC2_GCC3 | 117 | 147 | 6.6e-35 | 118.4 | 1.5e-06 | 0.0046 | 16.5 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 7 | TNFR_c6 | 126 | 144 | 9.0e-10 | 38.4 | 0.00014 | 0.41 | 10.7 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 8 | GCC2_GCC3 | 129 | 164 | 6.6e-35 | 118.4 | 1.6e-09 | 4.7e-06 | 26.0 |
| pfu_aug1.0_2784.1_51797.t1 | 6 | 5 | NCD3G | 142 | 183 | 8.3e-19 | 67.0 | 1.5e-06 | 0.0046 | 16.6 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 8 | TNFR_c6 | 143 | 165 | 9.0e-10 | 38.4 | 0.00014 | 0.42 | 10.7 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 9 | GCC2_GCC3 | 146 | 181 | 6.6e-35 | 118.4 | 1.0e-07 | 0.0003 | 20.2 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 9 | TNFR_c6 | 160 | 178 | 9.0e-10 | 38.4 | 0.076 | 230.0 | 1.9 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 10 | TNFR_c6 | 177 | 197 | 9.0e-10 | 38.4 | 0.0012 | 3.6 | 7.7 |
| pfu_aug1.0_2784.1_51797.t1 | 6 | 6 | NCD3G | 177 | 215 | 8.3e-19 | 67.0 | 9.6e-07 | 0.0029 | 17.3 |
| pfu_aug1.0_2784.1_51797.t1 | 10 | 10 | GCC2_GCC3 | 180 | 216 | 6.6e-35 | 118.4 | 3.8e-10 | 1.1e-06 | 28.0 |
| pfu_aug1.0_2784.1_51797.t1 | 11 | 11 | TNFR_c6 | 194 | 217 | 9.0e-10 | 38.4 | 3.0e-05 | 0.09 | 12.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2784.1_51797.t1 | gi|156406717|ref|XP_001641191.1| | predicted protein [Nematostella vectensis] | 7.9874e-44 |
Transcript
| Transcript ID | pfu_aug1.0_2784.1_51797.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2784.1_51797.t1 atgcctaattgtacaaattgttcagcaggatattttgccaatgtaacgggtctttcctcttgttacccctgtgaaggggg aacatatcaaaacctgacaggtcaagaacattgtcctctgtgtagaaagggaacataccaagatgaggaacatcaaagtg catgtaagttctgtgatccaggaacatatcagaacagatctggccagttagaatgtgagaaatgtagaccggggacattc cagaacagggagggaatggcgctttgtgaggtatgtcatgcaggggaatatcagaatgaagaaggacagaagtcttgtat aaagtgccctcctggtatgcaccaacaacaggagggccaaactgcatgtgtggaatgtagtccaggggagtacagtaaca tcagtggacaagctaattgtaaaaaatgtcgttctggaacatatcaagataagacaaaccaatcttcatgtatgaagtgt gatgctggaacacatcagaataaagagggccaaacgtcctgctttggctgcactgccgggcattatagcaatgtcagtgg agaatctgagtgtatgaaatgtaaacctggaacattccaagacaaagaaaaccagacatcttgtacagaatgccctgtgg ataagtactgcaaaaagtttaaccttgtgaccttgacctttgactacttttga |
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Protein
| Protein ID | pfu_aug1.0_2784.1_51797.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2784.1_51797.t1 MPNCTNCSAGYFANVTGLSSCYPCEGGTYQNLTGQEHCPLCRKGTYQDEEHQSACKFCDPGTYQNRSGQLECEKCRPGTF QNREGMALCEVCHAGEYQNEEGQKSCIKCPPGMHQQQEGQTACVECSPGEYSNISGQANCKKCRSGTYQDKTNQSSCMKC DAGTHQNKEGQTSCFGCTAGHYSNVSGESECMKCKPGTFQDKENQTSCTECPVDKYCKKFNLVTLTFDYF |
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