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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2787.1_66461
Locus scaffold2787.1 : 11581 ... 31345 : -
To GenomeBrowser scaffold2787.1:11581..31345
Genes list of scaffold scaffold2787.1
Synonym pfu_aug2.0_255.1_17193

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2787.1_66461.t1 gi|72014422|ref|XP_799755.1| 7.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_2787.1_66461.t1
Definition-
>pfu_aug1.0_2787.1_66461.t1
atgcgattcgaccccttccgatttacaccatcgtttggtggccctaaaaagcctcccttaccagggacgtacagagtgac
tatagaatgtaacatagaggaccagacgtacaccacagattatacagagtactatgaccagcctaacaatagggccgctt
ttcataattgggagcttgggttccatgtggcaaatatatacagctatgacacaaacgagctgctcaccatagaggaacag
tcgggagtgtgttctgtggacaaattgtcacaagctaacagtaacttcctatttggatacaccagtagtaacactgctaa
aggagttggaaagttatatagtgcttatggggctctcagattcggaggaaacatcacagagatatacaaaggcacaacca
ccgtcagaggcatgctagtgaaccattggcaatcctgtatgtactggaaaaatattgacgccacaatgacggtagactgg
tatttctcagataccagacctctgcctaatccatcaaactacttcagatttacttcagaaatcctcaatcctgatatgaa
atcaataggcttcataaaggaatggtatgactataacatgagtctggtaaggtatgattataaaccccaacctgagaacc
cctcaccttacggctttgacttactgtcagagatacacgactttagtgaagccaaatacaaggacacagctggtaaaaat
ctacagttattcaagtacatggtcattatggaagtacataagtggacgggtatctctcctctcagagtccaaaacgtcaa
tgttgattttgacgatgtggacgtcataatcaggttcactattctaggcggtgcacctattgctggtgacgtcacgaacc
cagtacaacaagttgaccttgaaacagcagccaatcagcttacggctgcaatcagtaaaggctcttttcaaatccctgtt
gatgttacaagtttagcaaaatctaaaatgtataaagctagtgcctatgtaattaacaccaaagccaacaatatcgtcag
taattactatgtggcacctcctaagaagacctcgtacacaggaggtcaaatggctggtcttggagttggaatgctggttc
tgttctttgtcattggttttgctgctgttttcctttacctgagaaataaaaacggacctatcccatcaaaaagtggaaat
acatcagtagacaatccatcctatgataaagagtga

Protein
Protein IDpfu_aug1.0_2787.1_66461.t1
Definition-
>pfu_aug1.0_2787.1_66461.t1
MRFDPFRFTPSFGGPKKPPLPGTYRVTIECNIEDQTYTTDYTEYYDQPNNRAAFHNWELGFHVANIYSYDTNELLTIEEQ
SGVCSVDKLSQANSNFLFGYTSSNTAKGVGKLYSAYGALRFGGNITEIYKGTTTVRGMLVNHWQSCMYWKNIDATMTVDW
YFSDTRPLPNPSNYFRFTSEILNPDMKSIGFIKEWYDYNMSLVRYDYKPQPENPSPYGFDLLSEIHDFSEAKYKDTAGKN
LQLFKYMVIMEVHKWTGISPLRVQNVNVDFDDVDVIIRFTILGGAPIAGDVTNPVQQVDLETAANQLTAAISKGSFQIPV
DVTSLAKSKMYKASAYVINTKANNIVSNYYVAPPKKTSYTGGQMAGLGVGMLVLFFVIGFAAVFLYLRNKNGPIPSKSGN
TSVDNPSYDKE

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