Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2791.1_51801
Locus scaffold2791.1 : 42286 ... 45813 : +
To GenomeBrowser scaffold2791.1:42286..45813
Genes list of scaffold scaffold2791.1
Synonym pfu_aug2.0_264.1_13897

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2791.1_51801.t1 gi|115375578|ref|ZP_01462836.1| 9.0e-14

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
mantle 1
mantleEdge 2
mantlePallium 2
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_2791.1_51801.t1
Definition-
>pfu_aug1.0_2791.1_51801.t1
atgccccactccttgccggtcgacatttttctttactcgtacgaagctgaattcattcaatctttggtctctgaagggaa
cagatacatagcttttaacttatacttcacttacagatacatagacgatgtgctgtccatcaataattcaaaattcgcgg
attaccttagcagaatctatccttcggagcttgacgtcgaagaaactacagagacaaataattcaacatcttatctgcac
ataatgttgtcctacgacactgatggtcacatgaacacatcacgctatgacaaacgtgtcgacttcaatttcaacatcac
aaacttcatcgcctgcttattgcgtgttcatatctcagttgatacgctatgccagagcaaatattatgaggacctgtata
aggaatggcatataaagtcagcaaatggcatatgtctaaacagcgcatgtcagaattacgtagatgaattgacttctgtg
gcaaaagactacgatcctatatatcttgttgcagcatgcattccatgtgccaaattatggccatggttaggacaggaact
acacaactcacagcataattttggatgttatggcacatgggtcgatgagaacttcaatccaactagcgtgtcatataaga
agctggaagcttttgtcaatgctgcatatgtcgaaaaaatgatagacgaggctacgctgacaaagatatacagtacatgc
atgcagtgtgaggctgacttcttcggatctgccacagcttaa

Protein
Protein IDpfu_aug1.0_2791.1_51801.t1
Definition-
>pfu_aug1.0_2791.1_51801.t1
MPHSLPVDIFLYSYEAEFIQSLVSEGNRYIAFNLYFTYRYIDDVLSINNSKFADYLSRIYPSELDVEETTETNNSTSYLH
IMLSYDTDGHMNTSRYDKRVDFNFNITNFIACLLRVHISVDTLCQSKYYEDLYKEWHIKSANGICLNSACQNYVDELTSV
AKDYDPIYLVAACIPCAKLWPWLGQELHNSQHNFGCYGTWVDENFNPTSVSYKKLEAFVNAAYVEKMIDEATLTKIYSTC
MQCEADFFGSATA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495