Gene
| Gene Model ID | pfu_aug1.0_279392.1_07050 |
|---|---|
| Locus | scaffold279392.1 : 6 ... 538 : + |
| To GenomeBrowser | scaffold279392.1:6..538 |
| Genes list of scaffold | scaffold279392.1 |
| Synonym | pfu_aug2.0_2.1_06691 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_279392.1_07050.t1 | 5 | 1 | V-SNARE_C | 1 | 17 | 1.1e-09 | 38.1 | 0.54 | 100.0 | 3.0 |
| pfu_aug1.0_279392.1_07050.t1 | 3 | 1 | COG2 | 2 | 41 | 6.4e-06 | 26.0 | 0.015 | 2.8 | 7.8 |
| pfu_aug1.0_279392.1_07050.t1 | 5 | 2 | V-SNARE_C | 12 | 45 | 1.1e-09 | 38.1 | 1.9e-05 | 0.0036 | 17.3 |
| pfu_aug1.0_279392.1_07050.t1 | 3 | 2 | COG2 | 23 | 71 | 6.4e-06 | 26.0 | 0.00035 | 0.065 | 13.1 |
| pfu_aug1.0_279392.1_07050.t1 | 5 | 3 | V-SNARE_C | 40 | 75 | 1.1e-09 | 38.1 | 1.6e-05 | 0.0029 | 17.6 |
| pfu_aug1.0_279392.1_07050.t1 | 3 | 3 | COG2 | 77 | 115 | 6.4e-06 | 26.0 | 0.0056 | 1.0 | 9.1 |
| pfu_aug1.0_279392.1_07050.t1 | 5 | 4 | V-SNARE_C | 80 | 111 | 1.1e-09 | 38.1 | 0.0028 | 0.52 | 10.4 |
| pfu_aug1.0_279392.1_07050.t1 | 5 | 5 | V-SNARE_C | 99 | 128 | 1.1e-09 | 38.1 | 0.082 | 15.0 | 5.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_279392.1_07050.t1 | gi|221136220|ref|XP_002171134.1| | 4.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_279392.1_07050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_279392.1_07050.t1 atgctgaacaaaataggtgacacgctgaatagagttcgcgacacgctgaacagagaacgcgacatgctgaacagagtaca tgacacactgaacagagtatgcgacacgctgaacagagtacgcgacacgctgaacagagaacgcgacatgctgaacagag tacgtgacacactgaacagtgtatgcgacacgctgaagagagtacgtggcatgctgaacaaaatactagtaggtgacaca ctgaaaagagaacacgacacgcttaacaaagtacgcgacacactgaacagagtatgcgacacgctgaaaagagaacggga tacgctgaacagagtatgcaatacgcggaacacagtatgtgacacgctgaacagagtaagcgacacgtga |
|
Protein
| Protein ID | pfu_aug1.0_279392.1_07050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_279392.1_07050.t1 MLNKIGDTLNRVRDTLNRERDMLNRVHDTLNRVCDTLNRVRDTLNRERDMLNRVRDTLNSVCDTLKRVRGMLNKILVGDT LKREHDTLNKVRDTLNRVCDTLKRERDTLNRVCNTRNTVCDTLNRVSDT |
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