Gene
| Gene Model ID | pfu_aug1.0_28001.1_33652 |
|---|---|
| Locus | scaffold28001.1 : 1 ... 6355 : - |
| To GenomeBrowser | scaffold28001.1:1..6355 |
| Genes list of scaffold | scaffold28001.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28001.1_33652.t1 | 1 | 1 | Vinculin | 100 | 165 | 4.7e-16 | 58.0 | 1.1e-19 | 8.1e-16 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_28001.1_33652.t1 | gi|291228088|ref|XP_002733996.1| | 2.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_28001.1_33652.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28001.1_33652.t1 atgaaacgtatttacattttcgacatctcctctgtaaccgctgcacagaattccacgaaatctagcaggaattacaggaa aatagtaaacttaattaaaggtgtgttgttccatcacgacaatgctcctgttcacaagtctgtcaccgtcatggctgcca ttcatgatccgccttattcacctgatcttgctccatcagactttcatctatttcaagagtcaagactgaaagcatctatt tctggcacccactttcagtctgacgctgacgtcatattttcagtggacggctttctggtgacaactcttgtgaatcagaa aagtccatcaaataaaaagaaaggacgctcaaagaaagcccatgtccttagtgctgccgtacagaaggctacagagaatt ttattgctcgaggagaggagattgcccatgaaaatcctgacgtaaaagctgacatgatggcagccgtagatgaagtcaga aagacaggtgaaaaagaacattttcattcaattgtgtttaaatatcatactacttattatttaggccaatcatatacata ttattaa |
|
Protein
| Protein ID | pfu_aug1.0_28001.1_33652.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28001.1_33652.t1 MKRIYIFDISSVTAAQNSTKSSRNYRKIVNLIKGVLFHHDNAPVHKSVTVMAAIHDPPYSPDLAPSDFHLFQESRLKASI SGTHFQSDADVIFSVDGFLVTTLVNQKSPSNKKKGRSKKAHVLSAAVQKATENFIARGEEIAHENPDVKADMMAAVDEVR KTGEKEHFHSIVFKYHTTYYLGQSYTYY |
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