Gene
| Gene Model ID | pfu_aug1.0_2810.1_66472 |
|---|---|
| Locus | scaffold2810.1 : 34906 ... 41886 : + |
| To GenomeBrowser | scaffold2810.1:34906..41886 |
| Genes list of scaffold | scaffold2810.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2810.1_66472.t1 | 2 | 1 | 7tm_1 | 6 | 17 | 3.09995e-41 | 141.2 | 0.64 | 3200.0 | -3.0 |
| pfu_aug1.0_2810.1_66472.t1 | 2 | 1 | 7TM_GPCR_Srsx | 11 | 16 | 1.6e-09 | 37.3 | 0.93 | 4600.0 | -3.6 |
| pfu_aug1.0_2810.1_66472.t1 | 2 | 2 | 7TM_GPCR_Srsx | 56 | 245 | 1.6e-09 | 37.3 | 3.2e-13 | 1.6e-09 | 37.3 |
| pfu_aug1.0_2810.1_66472.t1 | 2 | 2 | 7tm_1 | 61 | 257 | 3.09995e-41 | 141.2 | 7.00649e-45 | 3.59994e-41 | 141.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2810.1_66472.t1 | gi|118403349|emb|CAL69637.1| | predicted novel histamine H3-like G-protein coupled receptor [Branchiostoma floridae] | 4.0e-34 |
Transcript
| Transcript ID | pfu_aug1.0_2810.1_66472.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2810.1_66472.t1 atggaaatggttcgagtcttcgttttttcatcgatcatattgctatgtctggtgaagtcgagcaaagctgctgaaaatgg gacagaagaggaggaagaagaagatgatgtcatatttccaatatcagtcactattcctatgggcattgctatgggggctc tcatccttctagcaatagttggaaatctgctcacaattttatcctttttaaaagacaagaaactacacacagtctacaat attttcatcctaaaccttgcagtaaccgatcttttgattggctgtatcagcatgggtatctactcatcatatgacatttc ctcctaccattggcattttggataccatttctgcaaaacatggttggtgattgatttcaccctttgtttggagtctgttc ttataatgttcattctcagtatagacaggcttcttttacttaaacttggacctatgtacacacaaaaggcaactaacaga aaagcatacatatgcatcggactgtcctggactgtagcatttctattgtacagtcctgcaatcatcggctacgacatatg gacaggtcataatcccgtagaggacggagactgtgacgtacctttcgtaaatgacgtcgtctatacgtcagttacggcag tttttgaattcttggtcccgcttatagggatatctattattagcatagccatttacatcgaaatcaggaaacgaattctg gagagaaacaaagcaagacaacagtcgcataacaacgaaaatcacgcatccgagactaaaaactcgtcgggacattag |
|
Protein
| Protein ID | pfu_aug1.0_2810.1_66472.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2810.1_66472.t1 MEMVRVFVFSSIILLCLVKSSKAAENGTEEEEEEDDVIFPISVTIPMGIAMGALILLAIVGNLLTILSFLKDKKLHTVYN IFILNLAVTDLLIGCISMGIYSSYDISSYHWHFGYHFCKTWLVIDFTLCLESVLIMFILSIDRLLLLKLGPMYTQKATNR KAYICIGLSWTVAFLLYSPAIIGYDIWTGHNPVEDGDCDVPFVNDVVYTSVTAVFEFLVPLIGISIISIAIYIEIRKRIL ERNKARQQSHNNENHASETKNSSGH |
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